Crystal structure of peptide deformylase from Leptospira Interrogans (LiPDF) at pH6.5
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d1vevb_ | Alpha and beta proteins (a+b) | Peptide deformylase | Peptide deformylase | Peptide deformylase | Peptide deformylase | (Leptospira interrogans ) [TaxId: 173 ], | SCOPe (2.08) |
| A | d1veva_ | Alpha and beta proteins (a+b) | Peptide deformylase | Peptide deformylase | Peptide deformylase | Peptide deformylase | (Leptospira interrogans ) [TaxId: 173 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Sigma_1_2 | e1vevB1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: winged helix domain | F: Sigma_1_2 | ECOD (v294.1) |
| A | Sigma_1_2 | e1vevA1 | A: a/b three-layered sandwiches | X: HTH | H: Nudix | T: winged helix domain | F: Sigma_1_2 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.90.45.10 | Alpha Beta | Alpha-Beta Complex | Peptide Deformylase | Peptide deformylase | CATH (4.3.0) |
| A | 3.90.45.10 | Alpha Beta | Alpha-Beta Complex | Peptide Deformylase | Peptide deformylase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01327 | Polypeptide deformylase (Pep_deformylase) | Polypeptide deformylase | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Peptide deformylase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR023635 | Peptide deformylase | Family | |
| IPR036821 | Peptide deformylase superfamily | Homologous Superfamily |














