Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 Familyalpha-Amylases C-terminal beta-sheet domain8030530 4002636 SCOP2 (2022-06-29)
ASCOP2 FamilyAmylase catalytic domain8030963 4003138 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyGlycosyl hydrolase domain-like8042909 3001528 SCOP2 (2022-06-29)
ASCOP2 Superfamily(Trans)glycosidases8043342 3000313 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF16657e1uokA1 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: PF16657ECOD (1.6)
APF00128e1uokA2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PF00128ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A3.90.400.10 Alpha Beta Alpha-Beta Complex Oligo-1,6-glucosidase domain 2CATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00128Alpha amylase, catalytic domain (Alpha-amylase)Alpha amylase, catalytic domainAlpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, a ...Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain.
Domain
PF16657Maltogenic Amylase, C-terminal domain (Malt_amylase_C)Maltogenic Amylase, C-terminal domain- Family

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
oligo-1,6-glucosidase  M-CSA #285

Oligo-1,6-glucosidase (dextrin 6-alpha-D-glucanohydrolase) hydrolyses the non-reducing terminal alpha-1,6-glucosidic bonds of isomaltosaccharides, panose, and alpha-limit dextrins, but fails to act on alpha,1,4-glucosidic bonds of maltosaccharides [PMID:8370659]. The anomeric configuration of the substrate is retained, thus the mechanism proceeds via a double displacement process [PMID:9193006, PMID:10331869]. In addition, this enzyme belongs to the family 13 of glycosyl hydrolases, also known as the alpha-amylase family.

Defined by 5 residues: ASP:A-98ASP:A-199GLU:A-255HIS:A-328ASP:A-329
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