1UHB | pdb_00001uhb

Crystal structure of porcine alpha trypsin bound with auto catalyticaly produced native peptide at 2.15 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1uhb.1	All beta proteins	Trypsin-like serine proteases	Trypsin-like serine proteases	Eukaryotic proteases	Trypsin(ogen)	(Sus scrofa ) [TaxId: 9823 ],	SCOPe (2.08)
A	d1uhb.1	All beta proteins	Trypsin-like serine proteases	Trypsin-like serine proteases	Eukaryotic proteases	Trypsin(ogen)	(Sus scrofa ) [TaxId: 9823 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Trypsin	e1uhbB01	A: a/b three-layered sandwiches	X: Caspase-like	H: Caspase-like	T: Caspase-like	F: Trypsin	ECOD (v294.1)
A	Trypsin	e1uhbA01	A: a/b three-layered sandwiches	X: Caspase-like	H: Caspase-like	T: Caspase-like	F: Trypsin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.40.10.10	Mainly Beta	Beta Barrel	Thrombin, subunit H	Trypsin-like serine proteases	CATH (4.3.0)
A	2.40.10.10	Mainly Beta	Beta Barrel	Thrombin, subunit H	Trypsin-like serine proteases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF00089	Trypsin (Trypsin)	Trypsin		Domain
A	PF00089	Trypsin (Trypsin)	Trypsin		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth P]	9-mer peptide from Trypsin	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity cation binding ion binding binding metal ion binding small molecule binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process multicellular organismal process digestion	-
B	Trypsin	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity cation binding ion binding binding metal ion binding small molecule binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process multicellular organismal process digestion	-
A	Trypsin	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity cation binding ion binding binding metal ion binding small molecule binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process multicellular organismal process digestion	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth P]	IPR001254	Serine proteases, trypsin domain	Domain
C [auth P]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
C [auth P]	IPR050127	Serine Proteases (Peptidase S1 Family)	Family
C [auth P]	IPR018114	Serine proteases, trypsin family, histidine active site	Active Site
C [auth P]	IPR001314	Peptidase S1A, chymotrypsin family	Family
C [auth P]	IPR043504	Peptidase_S1_PA_chymotrypsin	Unknown
C [auth P]	IPR033116	Serine proteases, trypsin family, serine active site	Active Site
B	IPR001254	Serine proteases, trypsin domain	Domain
B	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
B	IPR050127	Serine Proteases (Peptidase S1 Family)	Family
B	IPR018114	Serine proteases, trypsin family, histidine active site	Active Site
B	IPR001314	Peptidase S1A, chymotrypsin family	Family
B	IPR043504	Peptidase_S1_PA_chymotrypsin	Unknown
B	IPR033116	Serine proteases, trypsin family, serine active site	Active Site
A	IPR001254	Serine proteases, trypsin domain	Domain
A	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
A	IPR050127	Serine Proteases (Peptidase S1 Family)	Family
A	IPR018114	Serine proteases, trypsin family, histidine active site	Active Site
A	IPR001314	Peptidase S1A, chymotrypsin family	Family
A	IPR043504	Peptidase_S1_PA_chymotrypsin	Unknown
A	IPR033116	Serine proteases, trypsin family, serine active site	Active Site