1TQZ | pdb_00001tqz

Solution structure of NECAP1 protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1tqza1	All beta proteins	PH domain-like barrel	PH domain-like	Necap1 N-terminal domain-like	Necap1	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Necap1 N-terminal domain-like	8020204	4001928	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PH domain-like	8032584	3000134	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF1681	e1tqzA1	A: beta barrels	X: PH domain-like	H: PH domain-like (From Topology)	T: PH domain-like	F: DUF1681	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07933	Protein of unknown function (DUF1681) (DUF1681)	Protein of unknown function (DUF1681)	This family is composed of sequences derived from a number of hypothetical eukaryotic proteins of unknown function.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	NECAP1	-	import into cell cellular localization transport establishment of localization presynaptic endocytosis vesicle-mediated transport vesicle-mediated transport in synapse localization establishment of localization in cell cellular process endocytosis establishment of protein localization nitrogen compound transport protein transport import into cell cellular localization transport establishment of localization presynaptic endocytosis vesicle-mediated transport vesicle-mediated transport in synapse localization establishment of localization in cell cellular process endocytosis establishment of protein localization nitrogen compound transport protein transport macromolecule localization intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane clathrin-coated pit endomembrane system presynapse synapse cell junction membrane-bounded organelle protein-containing complex intracellular anatomical structure vesicle coat intracellular vesicle cell periphery cellular anatomical structure plasma membrane membrane clathrin-coated pit endomembrane system presynapse synapse cell junction membrane-bounded organelle protein-containing complex intracellular anatomical structure vesicle coat intracellular vesicle membrane protein complex membrane coat intracellular organelle bounding membrane of organelle vesicle membrane cytoplasmic vesicle clathrin-coated vesicle clathrin vesicle coat coated vesicle vesicle clathrin-coated vesicle membrane coated membrane intracellular membrane-bounded organelle clathrin coat coated vesicle membrane cytoplasmic vesicle membrane organelle cytoplasm organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR012466	NECAP, PHear domain	Domain
A	IPR011993	PH-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.