1TMQ | pdb_00001tmq

STRUCTURE OF TENEBRIO MOLITOR LARVAL ALPHA-AMYLASE IN COMPLEX WITH RAGI BIFUNCTIONAL INHIBITOR


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 8037621 3000401 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGlycosyl hydrolase domain-like 8042902 3001528 SCOP2B (2022-06-29)
ASCOP2B Superfamily(Trans)glycosidases 8043329 3000313 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BGST_C_2e1tmqB1 A: alpha arraysX: Urease, gamma-subunitH: Urease, gamma-subunitT: Urease, gamma-subunitF: GST_C_2ECOD (v295.2)
ALdl_recept_be1tmqA1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Ldl_recept_bECOD (v295.2)
ANAD_binding_3e1tmqA2 A: alpha arraysX: C-terminal subdomain in Lon-related proteases catalytic domainsH: C-terminal subdomain in Lon-related proteases catalytic domainsT: C-terminal subdomain in Lon-related proteases catalytic domainsF: NAD_binding_3ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.110.10 Mainly Alpha Orthogonal Bundle Hydrophobic Seed Protein Plant lipid-transfer and hydrophobic proteinsCATH (4.3.0)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
PCA Parent Component: GLN

AA0031

:  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420