1T7S

Structural Genomics of Caenorhabditis elegans: Structure of BAG-1 protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1t7sa_	All alpha proteins	Spectrin repeat-like	BAG domain	BAG domain	BAG-family molecular chaperon regulator-1, BAG1	(Caenorhabditis elegans ) [TaxId: 6239 ],	SCOPe (2.08)
B	d1t7sb_	All alpha proteins	Spectrin repeat-like	BAG domain	BAG domain	BAG-family molecular chaperon regulator-1, BAG1	(Caenorhabditis elegans ) [TaxId: 6239 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	BAG domain	8027696	4002965	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	BAG domain	8040075	3001951	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	BAG domain	8040075	3001951	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF02179	e1t7sA1	A: alpha bundles	X: Spectrin repeat-like	H: BAG domain (From Topology)	T: BAG domain	F: PF02179	ECOD (1.6)
B	PF02179	e1t7sB1	A: alpha bundles	X: Spectrin repeat-like	H: BAG domain (From Topology)	T: BAG domain	F: PF02179	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.58.120	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
B	1.20.58.120	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00240	Ubiquitin family (ubiquitin)	Ubiquitin family	This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...	This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].	Domain
A, B	PF02179	BAG domain (BAG)	BAG domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	BAG-1 cochaperone	binding nucleotide binding adenyl-nucleotide exchange factor activity ATPase regulator activity nucleoside phosphate binding purine nucleotide binding organic cyclic compound binding adenyl nucleotide binding molecular function regulator activity heterocyclic compound binding small molecule binding ATPase activator activity molecular function activator activity protein binding binding nucleotide binding adenyl-nucleotide exchange factor activity ATPase regulator activity nucleoside phosphate binding purine nucleotide binding organic cyclic compound binding adenyl nucleotide binding molecular function regulator activity heterocyclic compound binding small molecule binding ATPase activator activity molecular function activator activity protein binding protein-folding chaperone binding	regulation of protein stability biological regulation regulation of biological quality protein stabilization organonitrogen compound metabolic process cellular biosynthetic process chaperone cofactor-dependent protein refolding cellular metabolic process primary metabolic process gene expression chaperone-mediated protein folding macromolecule biosynthetic process protein maturation organic substance metabolic process regulation of protein stability biological regulation regulation of biological quality protein stabilization organonitrogen compound metabolic process cellular biosynthetic process chaperone cofactor-dependent protein refolding cellular metabolic process primary metabolic process gene expression chaperone-mediated protein folding macromolecule biosynthetic process protein maturation organic substance metabolic process protein folding biosynthetic process organic substance biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process 'de novo' protein folding 'de novo' post-translational protein folding	membrane cellular anatomical entity intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR003103	BAG domain	Domain
A, B	IPR000626	Ubiquitin-like domain	Domain
A, B	IPR036533	BAG domain superfamily	Homologous Superfamily
A, B	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
A, B	IPR017093	Molecular chaperone regulator BAG-1	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.