1T0M | pdb_00001t0m

Conformational switch in polymorphic H-2K molecules containing an HSV peptide


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ESCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054571 3000071 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054571 3000071 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMHC antigen-recognition domain 8036210 3000521 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054611 3000071 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyMHC antigen-recognition domain 8036210 3000521 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054611 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ECopper-binde1t0mE1 A: a/b three-layered sandwichesX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Copper-bindECOD (v294.1)
BCopper-binde1t0mB1 A: a/b three-layered sandwichesX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Copper-bindECOD (v294.1)
ACopper-binde1t0mA1 A: a/b three-layered sandwichesX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Copper-bindECOD (v294.1)
AMHC_I_3e1t0mA2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: MHC_I_3ECOD (v294.1)
DCopper-binde1t0mD1 A: a/b three-layered sandwichesX: Phage tail fiber protein trimerization domainH: beta-Prism IT: beta-Prism IF: Copper-bindECOD (v294.1)
DMHC_I_3e1t0mD2 A: a/b three-layered sandwichesX: ETN0001 domain-likeH: ETN0001 domain-likeT: Mss4-likeF: MHC_I_3ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B, E
MH1-K1b (H2-K1b) B2M Mus musculus (house mouse) B2M*01 C-LIKE-DOMAIN C-LIKE MH MH1-ALPHA_B2M IMGT (202611-0)
A, D
MH1-K1b (H2-K1b) I-ALPHA Mus musculus (house mouse) MH1-K1b G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2, C-LIKE-DOMAIN C-LIKE MH MH1-ALPHA_B2M IMGT (202611-0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, E
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
A, D
PF00129Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I)Class I Histocompatibility antigen, domains alpha 1 and 2Domain
A, D
PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth P],
F [auth Q]
Glycoprotein B
B, E
Beta-2-microglobulin
A, D
H-2 class I histocompatibility antigen, K-B alpha chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth P],
F [auth Q]
IPR035381Herpesvirus Glycoprotein B, PH-like domain 2Domain
C [auth P],
F [auth Q]
IPR035377Herpesvirus Glycoprotein B, PH-like domain 1Domain
C [auth P],
F [auth Q]
IPR055341Herpesvirus glycoprotein B ectodomain C-terminalDomain
C [auth P],
F [auth Q]
IPR000234Herpesvirus Glycoprotein BFamily
C [auth P],
F [auth Q]
IPR038631Herpesvirus Glycoprotein B, PH-like domain 2 superfamilyHomologous Superfamily
B, E
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B, E
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
B, E
IPR013783Immunoglobulin-like foldHomologous Superfamily
B, E
IPR007110Immunoglobulin-like domainDomain
B, E
IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
B, E
IPR003597Immunoglobulin C1-setDomain
B, E
IPR015707Beta-2-MicroglobulinFamily
A, D
IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A, D
IPR010579MHC class I, alpha chain, C-terminalDomain
A, D
IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
A, D
IPR001039MHC class I alpha chain, alpha1 alpha2 domainsDomain
A, D
IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A, D
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, D
IPR007110Immunoglobulin-like domainDomain
A, D
IPR050208Antigen-presenting and immune regulatory MHC class I-relatedFamily
A, D
IPR003597Immunoglobulin C1-setDomain
A, D
IPR011161MHC class I-like antigen recognition-likeDomain
A, D
IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily