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A Dimer interface mutant of ornithine decarboxylase reveals structure of gem diamine intermediate External Resource: Annotation Chains Domain Info Class Fold Superfamily Family Domain Species Provenance Source (Version) D [auth B] d1szrb1 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Eukaryotic ODC-like Eukaryotic ornithine decarboxylase (ODC) Trypanosoma brucei brucei ) [TaxId: 5702 ], SCOPe (2.08) D [auth B] d1szrb2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Eukaryotic ornithine decarboxylase Trypanosoma brucei brucei ) [TaxId: 5702 ], SCOPe (2.08) C [auth A] d1szra1 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Eukaryotic ODC-like Eukaryotic ornithine decarboxylase (ODC) Trypanosoma brucei brucei ) [TaxId: 5702 ], SCOPe (2.08) C [auth A] d1szra2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Eukaryotic ornithine decarboxylase Trypanosoma brucei brucei ) [TaxId: 5702 ], SCOPe (2.08) B [auth D] d1szrd1 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Eukaryotic ODC-like Eukaryotic ornithine decarboxylase (ODC) Trypanosoma brucei brucei ) [TaxId: 5702 ], SCOPe (2.08) B [auth D] d1szrd2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Eukaryotic ornithine decarboxylase Trypanosoma brucei brucei ) [TaxId: 5702 ], SCOPe (2.08) A [auth C] d1szrc1 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like Alanine racemase C-terminal domain-like Eukaryotic ODC-like Eukaryotic ornithine decarboxylase (ODC) Trypanosoma brucei brucei ) [TaxId: 5702 ], SCOPe (2.08) A [auth C] d1szrc2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Eukaryotic ornithine decarboxylase Trypanosoma brucei brucei ) [TaxId: 5702 ], SCOPe (2.08)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) D [auth B] CBM32 e1szrB1 A: alpha arrays X: HTH H: HTH T: winged helix domain F: CBM32 ECOD (v295.2) C [auth A] V-set e1szrA3 A: alpha arrays X: Subtilisin-like H: Subtilisin-like T: Subtilisin-like F: V-set ECOD (v295.2) B [auth D] NAD_binding_3 e1szrD2 A: alpha arrays X: C-terminal subdomain in Lon-related proteases catalytic domains H: C-terminal subdomain in Lon-related proteases catalytic domains T: C-terminal subdomain in Lon-related proteases catalytic domains F: NAD_binding_3 ECOD (v295.2) B [auth D] GP41 e1szrD1 A: alpha arrays X: PBZ domain H: PBZ domain T: PBZ domain F: GP41 ECOD (v295.2) A [auth C] V-set e1szrC3 A: alpha arrays X: Subtilisin-like H: Subtilisin-like T: Subtilisin-like F: V-set ECOD (v295.2)
Chains Accession Name Type A [auth C] ,B [auth D] ,C [auth A] ,D [auth B] IPR002433 Ornithine decarboxylase Family A [auth C] ,B [auth D] ,C [auth A] ,D [auth B] IPR029066 PLP-binding barrel Homologous Superfamily A [auth C] ,B [auth D] ,C [auth A] ,D [auth B] IPR009006 Alanine racemase/group IV decarboxylase, C-terminal Homologous Superfamily A [auth C] ,B [auth D] ,C [auth A] ,D [auth B] IPR000183 Ornithine/DAP/Arg decarboxylase Family A [auth C] ,B [auth D] ,C [auth A] ,D [auth B] IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal Domain A [auth C] ,B [auth D] ,C [auth A] ,D [auth B] IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Binding Site