1SET

CRYSTAL STRUCTURES AT 2.5 ANGSTROMS RESOLUTION OF SERYL-TRNA SYNTHETASE COMPLEXED WITH TWO DIFFERENT ANALOGUES OF SERYL-ADENYLATE


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyClass II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 8023507 4001782 SCOP2 (2022-06-29)
ASCOP2 FamilySeryl-tRNA synthetase (SerRS) 8023939 4000617 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyClass II aaRS and biotin synthetases 8035887 3000058 SCOP2 (2022-06-29)
ASCOP2 SuperfamilytRNA-binding arm 8036318 3000776 SCOP2 (2022-06-29)
BSCOP2B SuperfamilytRNA-binding arm 8036318 3000776 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClass II aaRS and biotin synthetases 8035887 3000058 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASeryl_tRNA_Ne1setA1 A: alpha bundlesX: Long alpha-hairpinH: tRNA-binding arm (From Topology)T: tRNA-binding armF: Seryl_tRNA_NECOD (1.6)
AtRNA-synt_2be1setA2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2bECOD (1.6)
BSeryl_tRNA_Ne1setB1 A: alpha bundlesX: Long alpha-hairpinH: tRNA-binding arm (From Topology)T: tRNA-binding armF: Seryl_tRNA_NECOD (1.6)
BtRNA-synt_2be1setB2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2bECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00587tRNA synthetase class II core domain (G, H, P, S and T) (tRNA-synt_2b)tRNA synthetase class II core domain (G, H, P, S and T)tRNA-synt_2b is a family of largely threonyl-tRNA members.Domain
A, B
PF02403Seryl-tRNA synthetase N-terminal domain (Seryl_tRNA_N)Seryl-tRNA synthetase N-terminal domainThis domain is found associated with the Pfam tRNA synthetase class II domain (Pfam:PF00587) and represents the N-terminal domain of seryl-tRNA synthetase.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
SERYL-tRNA SYNTHETASE