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 1RHC | pdb_00001rhc

F420-dependent secondary alcohol dehydrogenase in complex with an F420-acetone adduct

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1rhca_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Bacterial luciferase-like F420 dependent oxidoreductases Coenzyme F420 dependent secondary alcohol dehydrogenase (Methanoculleus thermophilus ) [TaxId: 2200 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyF420 dependent oxidoreductases 8028259 4003322 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBacterial luciferase-like 8040638 3000585 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ABac_luciferasee1rhcA1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: Bac_luciferaseECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.30 Alpha Beta Alpha-Beta Barrel TIM Barrel Luciferase-like domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F420-dependent alcohol dehydrogenase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR050564F420-dependent glucose-6-phosphate dehydrogenase/merFamily
IPR011251Luciferase-like domainDomain
IPR019945F420-dependent glucose-6-phosphate dehydrogenase-relatedFamily
IPR036661Luciferase-like domain superfamilyHomologous Superfamily

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
secondary-alcohol dehydrogenase (coenzyme-F420)  M-CSA #532

F420-dependent secondary alcohol dehydrogenase (Adf) from Methanoculleus thermophillicus is a member of the bacterial luciferase family. It catalyses the reduction of secondary alcohols no larger than isopentanol into their corresponding ketones, and is involved in the final process of anaerobic degradation of biomass.

Defined by 3 residues: HIS:A-39TRP:A-43GLU:A-108
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Explore in 3D: M-CSA Motif Definition
Search M-CSA Motif
EC: 1.1.99 (PDB Primary Data)
EC: 1.1.98.5 (UniProt)