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Structure of fused docking domains from the erythromycin polyketide synthase (DEBS), a model for the interaction between DEBS 2 and DEBS 3: The A domain External Resource: Annotation Domain Annotation: SCOP2 Classification SCOP2 Database Homepage Chains Type Family Name Domain Identifier Family Identifier Provenance Source (Version) A SCOP2 Family Docking domain A of the erythromycin polyketide synthase (DEBS) 8027085 4000653 SCOP2 (2022-06-29) A SCOP2 Superfamily Docking domain A of the erythromycin polyketide synthase (DEBS) 8039464 3000887 SCOP2 (2022-06-29) B SCOP2B Superfamily Docking domain A of the erythromycin polyketide synthase (DEBS) 8039464 3000887 SCOP2B (2022-06-29)
Chains Family Name Domain Identifier Architecture Possible Homology Homology Topology Family Provenance Source (Version) A PF09277 e1pzqA1 A: alpha duplicates or obligate multimers X: Dimerisation interlock H: Docking domain A of the erythromycin polyketide synthase (DEBS) (From Topology) T: Docking domain A of the erythromycin polyketide synthase (DEBS) F: PF09277 ECOD (1.6) B PF09277 e1pzqB1 A: alpha duplicates or obligate multimers X: Dimerisation interlock H: Docking domain A of the erythromycin polyketide synthase (DEBS) (From Topology) T: Docking domain A of the erythromycin polyketide synthase (DEBS) F: PF09277 ECOD (1.6)
Chains Accession Name Description Comments Source PF09277 Erythronolide synthase, docking (Erythro-docking) Erythronolide synthase, docking Members of this family of docking domains are found in prokaryotic erythronolide synthase. They adopt a structure consisting of a bundle of four alpha-helices, and mediate homodimerisation of the protein, stabilising the resulting complex [1]. Domain
Chains Polymer Molecular Function Biological Process Cellular Component Erythronolide synthase -
Chains Accession Name Type IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Homologous Superfamily IPR014031 Beta-ketoacyl synthase, C-terminal Domain IPR006162 Phosphopantetheine attachment site PTM IPR013154 Alcohol dehydrogenase-like, N-terminal Domain IPR020807 Polyketide synthase, dehydratase domain Domain IPR014030 Beta-ketoacyl synthase, N-terminal Domain IPR036347 Erythronolide synthase, docking domain superfamily Homologous Superfamily IPR049552 Polyketide synthase, dehydratase domain, N-terminal Domain IPR049551 Polyketide synthase, dehydratase domain, C-terminal Domain IPR020843 Polyketide synthase, enoylreductase domain Domain IPR013968 Polyketide synthase, ketoreductase domain Domain IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Homologous Superfamily IPR020806 Polyketide synthase, phosphopantetheine-binding domain Domain IPR014043 Acyl transferase Domain IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Domain IPR036736 ACP-like superfamily Homologous Superfamily IPR015083 Polyketide synthase, docking domain Domain IPR032821 Polyketide synthase, C-terminal extension Domain IPR011032 GroES-like superfamily Homologous Superfamily IPR009081 Phosphopantetheine binding ACP domain Domain IPR016039 Thiolase-like Homologous Superfamily IPR001227 Acyl transferase domain superfamily Homologous Superfamily IPR036291 NAD(P)-binding domain superfamily Homologous Superfamily IPR018201 Beta-ketoacyl synthase, active site Active Site IPR042104 Polyketide synthase, dehydratase domain superfamily Homologous Superfamily IPR015357 Erythronolide synthase, docking Domain