1PMH
Crystal structure of Caldicellulosiruptor saccharolyticus CBM27-1 in complex with mannohexaose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | d1pmhx_ | All beta proteins | Galactose-binding domain-like | Galactose-binding domain-like | Family 27 carbohydrate binding module, CBM27 | Beta-1,4-mannanase ManA | (Caldicellulosiruptor saccharolyticus ) [TaxId: 44001 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth X] | SCOP2 Family | family 27 carbohydrate binding module, cbm27 | 8025808 | 4003903 | SCOP2 (2022-06-29) |
A [auth X] | SCOP2 Superfamily | galactose-binding domain-like | 8038187 | 3000087 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | CBM27 | e1pmhX1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: CBM27 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X] | PF09212 | Carbohydrate binding module 27 (CBM27) | Carbohydrate binding module 27 | Members of this family are carbohydrate binding modules that bind to beta-1, 4-manno-oligosaccharides, carob galactomannan, and konjac glucomannan, but not to cellulose (insoluble and soluble) or soluble birchwood xylan. They adopt a beta sandwich st ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth X] | beta-1,4-mannanase |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X] | IPR005084 | Carbohydrate binding module family 6 | Domain |
A [auth X] | IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily |
A [auth X] | IPR022790 | Glycosyl hydrolase family 26 domain | Domain |
A [auth X] | IPR015295 | Carbohydrate binding module 27 | Domain |
A [auth X] | IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily |
A [auth X] | IPR000805 | Glycoside hydrolase family 26 | Family |