Three-Dimensional Structure Of a Single Chain Fv Fragment Complexed With The peptide GCN4(7P-14P).
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth L] | d1p4bl_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | Immunoglobulin light chain lambda variable domain, VL-lambda | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
| B [auth H] | d1p4bh_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | Immunoglobulin heavy chain variable domain, VH | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth L] | Copper-bind | e1p4bL1 | A: alpha arrays | X: Phage tail fiber protein trimerization domain | H: Phage tail fiber protein trimerization domain | T: Phage tail fiber protein trimerization domain | F: Copper-bind | ECOD (v295.2) |
| B [auth H] | Copper-bind | e1p4bH1 | A: alpha arrays | X: Phage tail fiber protein trimerization domain | H: Phage tail fiber protein trimerization domain | T: Phage tail fiber protein trimerization domain | F: Copper-bind | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| A [auth L] | Fv fragment | V-LAMBDA | Mus musculus (house mouse) | IGLV1*01, IGLJ1*01 | V-DOMAIN V-LAMBDA | IG | FV-HEAVY_LAMBDA | IMGT (202642-0) |
| B [auth H] | Fv fragment | VH | Mus musculus (house mouse) | IGHV2-6-7*01, IGHV2-6-7*02, IGHJ2*01 | V-DOMAIN VH | IG | FV-HEAVY_LAMBDA | IMGT (202642-0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth L] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
| B [auth H] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth L] | Antibody Variable light chain | - | ||
| B [auth H] | Antibody Variable heavy chain |
| ||
| C [auth P] | GCN4(7P-14P) peptide | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth L] | IPR050150 | Immunoglobulin Variable Light Chain | Family |
| A [auth L] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
| A [auth L] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
| A [auth L] | IPR013106 | Immunoglobulin V-set domain | Domain |
| A [auth L] | IPR003599 | Immunoglobulin domain subtype | Domain |
| A [auth L] | IPR007110 | Immunoglobulin-like domain | Domain |
| B [auth H] | IPR050199 | Immunoglobulin Heavy Variable | Family |
| B [auth H] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
| B [auth H] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
| B [auth H] | IPR013106 | Immunoglobulin V-set domain | Domain |
| B [auth H] | IPR007110 | Immunoglobulin-like domain | Domain |