Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyTombusviridae-like VP8021835 4003478 SCOP2 (2022-06-29)
ASCOP2 FamilyCNV-CP protruding P-domain-like8089970 4007693 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPositive stranded ssRNA viruses-like8034215 3000918 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCNV-CP protruding P-domain-like8089971 3002408 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyPositive stranded ssRNA viruses-like8034215 3000918 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCNV-CP protruding P-domain-like8089971 3002408 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPositive stranded ssRNA viruses-like8034215 3000918 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCNV-CP protruding P-domain-like8089971 3002408 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00729e1opoA2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)
APF08462e1opoA3 A: beta sandwichesX: jelly-rollH: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology)T: ssRNA positive-strand viruses coat protein P (projecting) domainF: PF08462ECOD (1.6)
BPF00729e1opoB2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)
BPF08462e1opoB1 A: beta sandwichesX: jelly-rollH: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology)T: ssRNA positive-strand viruses coat protein P (projecting) domainF: PF08462ECOD (1.6)
CPF00729e1opoC2 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00729ECOD (1.6)
CPF08462e1opoC1 A: beta sandwichesX: jelly-rollH: ssRNA positive-strand viruses coat protein P (projecting) domain (From Topology)T: ssRNA positive-strand viruses coat protein P (projecting) domainF: PF08462ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
A2.60.40.1780 Mainly Beta Sandwich Immunoglobulin-like Carmovirus coat proteinCATH (4.3.0)
B2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.40.1780 Mainly Beta Sandwich Immunoglobulin-like Carmovirus coat proteinCATH (4.3.0)
C2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
C2.60.40.1780 Mainly Beta Sandwich Immunoglobulin-like Carmovirus coat proteinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF08462Carmovirus coat protein (Carmo_coat_C)Carmovirus coat protein- Family
A, B, C
PF00729Viral coat protein (S domain) (Viral_coat)Viral coat protein (S domain)- Domain

InterPro: Protein Family Classification InterPro Database Homepage