1OPO | pdb_00001opo

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d1opoc_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	Tombusviridae-like VP	Carmovirus coat protein	(Carnation mottle virus ) [TaxId: 11986 ],	SCOPe (2.08)
B	d1opob_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	Tombusviridae-like VP	Carmovirus coat protein	(Carnation mottle virus ) [TaxId: 11986 ],	SCOPe (2.08)
A	d1opoa_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	Tombusviridae-like VP	Carmovirus coat protein	(Carnation mottle virus ) [TaxId: 11986 ],	SCOPe (2.08)

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8034215	3000918	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CNV-CP protruding P-domain-like	8089971	3002408	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8034215	3000918	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CNV-CP protruding P-domain-like	8089971	3002408	SCOP2B (2022-06-29)
A	SCOP2 Family	Tombusviridae-like VP	8021835	4003478	SCOP2 (2022-06-29)
A	SCOP2 Family	CNV-CP protruding P-domain-like	8089970	4007693	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Positive stranded ssRNA viruses-like	8034215	3000918	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CNV-CP protruding P-domain-like	8089971	3002408	SCOP2 (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	ERAP1_C	e1opoC1	A: beta barrels	X: ACP-like	H: Phage tail fiber protein trimerization domain	T: Phage tail fiber protein trimerization domain	F: ERAP1_C	ECOD (v294.2)
B	ERAP1_C	e1opoB1	A: beta barrels	X: ACP-like	H: Phage tail fiber protein trimerization domain	T: Phage tail fiber protein trimerization domain	F: ERAP1_C	ECOD (v294.2)
A	Viral_coat	e1opoA3	A: beta barrels	X: Caspase-like	H: Caspase-like	T: Caspase-like	F: Viral_coat	ECOD (v294.2)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
C	2.60.40.1780	Mainly Beta	Sandwich	Immunoglobulin-like	Carmovirus coat protein	CATH (4.3.0)
B	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
B	2.60.40.1780	Mainly Beta	Sandwich	Immunoglobulin-like	Carmovirus coat protein	CATH (4.3.0)
A	2.60.120.20	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
A	2.60.40.1780	Mainly Beta	Sandwich	Immunoglobulin-like	Carmovirus coat protein	CATH (4.3.0)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Coat protein	structural molecule activity RNA binding binding nucleic acid binding	-	viral capsid T=3 icosahedral viral capsid icosahedral viral capsid virion component

Chains	Accession	Name	Type
A, B, C	IPR029053	Viral coat protein subunit	Homologous Superfamily
A, B, C	IPR000937	Icosahedral viral capsid protein, S domain	Domain
A, B, C	IPR013669	Coat protein, C-terminal, Carmoviral	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.