1NLX | pdb_00001nlx

Crystal Structure of PHL P 6, A Major Timothy Grass Pollen Allergen Co-Crystallized with Zinc

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
N	d1nlxn_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
M	d1nlxm_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
L	d1nlxl_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
K	d1nlxk_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
J	d1nlxj_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
I	d1nlxi_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
H	d1nlxh_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
G	d1nlxg_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
F	d1nlxf_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
E	d1nlxe_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
D	d1nlxd_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
C	d1nlxc_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
B	d1nlxb_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)
A	d1nlxa_	All alpha proteins	Four-helical up-and-down bundle	Group V grass pollen allergen	Group V grass pollen allergen	Pollen allergen Phl P 6	timothy grass (Phleum pratense ) [TaxId: 15957 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
N	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2B (2022-06-29)
A	SCOP2 Family	Group V grass pollen allergen	8031496	4002306	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Group V grass pollen allergen	8043874	3001079	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
N		e1nlxN1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
M		e1nlxM1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
L		e1nlxL1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
K		e1nlxK1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
J		e1nlxJ1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
I		e1nlxI1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
H		e1nlxH1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
G		e1nlxG1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
F		e1nlxF1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
E		e1nlxE1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
D		e1nlxD1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
C		e1nlxC1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
B		e1nlxB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F:	ECOD (v294.1)
A	Pollen_allerg_2	e1nlxA1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Group V grass pollen allergen	T: Group V grass pollen allergen	F: Pollen_allerg_2	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
N	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
M	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
L	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
K	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
J	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
I	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
H	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
G	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
F	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
E	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
D	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
C	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
B	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)
A	1.20.120.320	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Group V grass pollen allergen	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	IPR002914	Pollen allergen Poa p IX/Phl p VI	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	IPR035506	Pollen allergen/Uncharacterized protein Os	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.