1N6V | pdb_00001n6v

Average structure of the interferon-binding ectodomain of the human type I interferon receptor

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1n6va1	All beta proteins	Immunoglobulin-like beta-sandwich	Fibronectin type III	Fibronectin type III	Interferon-alpha/beta receptor beta chain	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d1n6va3	Artifacts	Tags	Tags	Tags	C-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Fibronectin type III	8055155	3002063	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Fibronectin type III	8055541	3002063	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Copper-bind	e1n6vA1	A: a/b three-layered sandwiches	X: Phage tail fiber protein trimerization domain	H: beta-Prism I	T: beta-Prism I	F: Copper-bind	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01108	Tissue factor (Tissue_fac)	Tissue factor	-	Family
A	PF09294	Interferon-alpha/beta receptor, fibronectin type III (Interfer-bind)	Interferon-alpha/beta receptor, fibronectin type III	Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Interferon-alpha/beta receptor beta chain	protein binding binding cytokine binding protein-macromolecule adaptor activity JAK pathway signal transduction adaptor activity molecular adaptor activity signaling adaptor activity kinase binding enzyme binding protein kinase binding molecular transducer activity transmembrane signaling receptor activity signaling receptor activity type I interferon receptor activity protein binding binding cytokine binding protein-macromolecule adaptor activity JAK pathway signal transduction adaptor activity molecular adaptor activity signaling adaptor activity kinase binding enzyme binding protein kinase binding molecular transducer activity transmembrane signaling receptor activity signaling receptor activity type I interferon receptor activity interferon receptor activity cytokine receptor activity immune receptor activity type I interferon binding interferon binding	cellular response to stimulus cell surface receptor signaling pathway via STAT regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell communication cellular process signal transduction cell surface receptor signaling pathway via JAK-STAT biological process involved in interspecies interaction between organisms response to other organism cellular response to stimulus cell surface receptor signaling pathway via STAT regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell communication cellular process signal transduction cell surface receptor signaling pathway via JAK-STAT biological process involved in interspecies interaction between organisms response to other organism response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus response to peptide response to interferon-alpha response to chemical response to cytokine response to interferon-beta defense response to virus defense response response to stress cellular response to interferon-beta cellular response to cytokine stimulus cellular response to virus cytokine-mediated signaling pathway interferon-mediated signaling pathway cellular response to type I interferon innate immune response immune response defense response to symbiont immune system process defense response to other organism type I interferon-mediated signaling pathway response to type I interferon	protein-containing complex signaling receptor complex cellular anatomical structure extracellular region cell periphery plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR050650	Type-II_Cytokine-TF_Rcpt	Unknown
A	IPR003961	Fibronectin type III	Domain
A	IPR015373	Interferon/interleukin receptor domain	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR036116	Fibronectin type III superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P48551	immunodeficiency 45 hepatitis B virus infection primary immunodeficiency with post-measles-mumps-rubella vaccine viral infection rheumatoid arthritis acquired polycythemia vera Chronic type B viral hepatitis gastric carcinoma lung cancer ovarian cancer Pick disease psoriasis atypical teratoid rhabdoid tumor cutaneous lupus erythematosus glioblastoma intellectual disability immunodeficiency 45 hepatitis B virus infection primary immunodeficiency with post-measles-mumps-rubella vaccine viral infection rheumatoid arthritis acquired polycythemia vera Chronic type B viral hepatitis gastric carcinoma lung cancer ovarian cancer Pick disease psoriasis atypical teratoid rhabdoid tumor cutaneous lupus erythematosus glioblastoma intellectual disability medulloblastoma pancreatic ductal adenocarcinoma pilocytic astrocytoma relapsing-remitting multiple sclerosis Down syndrome large cell medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.