Structure of A Catalytically Inactive Mutant (K223A) of C-DES with a Substrate (Cystine) Linked to the Co-Factor
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d1n31b1 | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | Cystathionine synthase-like | Cystine C-S lyase C-des | (Synechocystis sp. PCC 6714 ) [TaxId: 1147 ], | SCOPe (2.08) |
| B | d1n31b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Synechocystis sp. PCC 6714 ) [TaxId: 1147 ], | SCOPe (2.08) |
| A | d1n31a1 | Alpha and beta proteins (a/b) | PLP-dependent transferase-like | PLP-dependent transferases | Cystathionine synthase-like | Cystine C-S lyase C-des | (Synechocystis sp. PCC 6714 ) [TaxId: 1147 ], | SCOPe (2.08) |
| A | d1n31a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Synechocystis sp. PCC 6714 ) [TaxId: 1147 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Aminotran_3 | e1n31B2 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Aminotran_3 | ECOD (v295.2) |
| A | Aminotran_3 | e1n31A2 | A: alpha arrays | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: Fusion glycoprotein F2 | F: Aminotran_3 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.90.1150.10 | Alpha Beta | Alpha-Beta Complex | Aspartate Aminotransferase, domain 1 | Aspartate Aminotransferase, domain 1 | CATH (4.3.0) |
| B | 3.40.640.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aspartate Aminotransferase | domain 2 | CATH (4.3.0) |
| A | 3.90.1150.10 | Alpha Beta | Alpha-Beta Complex | Aspartate Aminotransferase, domain 1 | Aspartate Aminotransferase, domain 1 | CATH (4.3.0) |
| A | 3.40.640.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aspartate Aminotransferase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00266 | Aminotransferase class-V (Aminotran_5) | Aminotransferase class-V | This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR020578 | Aminotransferase class-V, pyridoxal-phosphate binding site | Binding Site | |
| IPR015424 | Pyridoxal phosphate-dependent transferase | Homologous Superfamily | |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | Homologous Superfamily | |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | Homologous Superfamily | |
| IPR000192 | Aminotransferase class V domain | Domain |
