1N26
Crystal Structure of the extra-cellular domains of Human Interleukin-6 Receptor alpha chain
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1n26a1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | I set domains | Interleukin-6 receptor alpha chain, N-terminal domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d1n26a2 | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | Fibronectin type III | Interleukin-6 receptor alpha chain, domains 2 and 3 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | I set domains | 8054842 | 4007543 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Fibronectin type III | 8055152 | 4007555 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Fibronectin type III | 8055538 | 4007555 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Immunoglobulin (Ig) domain-like | 8054843 | 3000071 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Fibronectin type III | 8055153 | 3002063 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Fibronectin type III | 8055539 | 3002063 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | I-set_4 | e1n26A3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: I-set_4 | ECOD (1.6) |
A | IL6Ra-bind | e1n26A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: IL6Ra-bind | ECOD (1.6) |
A | fn3_6 | e1n26A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3_6 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
IL6R (Interleukin-6 receptor subunit alpha) | 1C-LIKE-2F-DOMAIN | Homo sapiens (human) | IL6R | C-LIKE-DOMAIN C-LIKE, F-LIKE-DOMAIN F-DOMAIN | RPI | 1C-LIKE-2F-DOMAIN | IMGT (202415-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09240 | Interleukin-6 receptor alpha chain, binding (IL6Ra-bind) | Interleukin-6 receptor alpha chain, binding | Members of this family adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 [1]. | Domain | |
PF00047 | Immunoglobulin domain (ig) | Immunoglobulin domain | Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prot ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
IPR003530 | Long hematopoietin receptor, soluble alpha chain, conserved site | Conserved Site | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR013151 | Immunoglobulin | Domain | |
IPR007110 | Immunoglobulin-like domain | Domain | |
IPR003599 | Immunoglobulin subtype | Domain | |
IPR003598 | Immunoglobulin subtype 2 | Domain | |
IPR015321 | Type I cytokine receptor, cytokine-binding domain | Domain | |
IPR003961 | Fibronectin type III | Domain | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |