1N0F

CRYSTAL STRUCTURE OF A CELL DIVISION AND CELL WALL BIOSYNTHESIS PROTEIN UPF0040 FROM MYCOPLASMA PNEUMONIAE: INDICATION OF A NOVEL FOLD WITH A POSSIBLE NEW CONSERVED SEQUENCE MOTIF

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1n0fa1	All beta proteins	Double-split beta-barrel	AbrB/MazE/MraZ-like	Hypothetical protein MraZ	Hypothetical protein MraZ	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
A	d1n0fa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
B	d1n0fb1	All beta proteins	Double-split beta-barrel	AbrB/MazE/MraZ-like	Hypothetical protein MraZ	Hypothetical protein MraZ	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
B	d1n0fb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
C	d1n0fc_	All beta proteins	Double-split beta-barrel	AbrB/MazE/MraZ-like	Hypothetical protein MraZ	Hypothetical protein MraZ	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
D	d1n0fd_	All beta proteins	Double-split beta-barrel	AbrB/MazE/MraZ-like	Hypothetical protein MraZ	Hypothetical protein MraZ	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
E	d1n0fe_	All beta proteins	Double-split beta-barrel	AbrB/MazE/MraZ-like	Hypothetical protein MraZ	Hypothetical protein MraZ	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
F	d1n0ff_	All beta proteins	Double-split beta-barrel	AbrB/MazE/MraZ-like	Hypothetical protein MraZ	Hypothetical protein MraZ	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
G	d1n0fg_	All beta proteins	Double-split beta-barrel	AbrB/MazE/MraZ-like	Hypothetical protein MraZ	Hypothetical protein MraZ	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)
H	d1n0fh_	All beta proteins	Double-split beta-barrel	AbrB/MazE/MraZ-like	Hypothetical protein MraZ	Hypothetical protein MraZ	(Mycoplasmoides pneumoniae ) [TaxId: 2104 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	AbrB/MazE/MraZ-like	8036566	3000181	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	AbrB/MazE/MraZ-like	8036566	3000181	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	AbrB/MazE/MraZ-like	8036566	3000181	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	AbrB/MazE/MraZ-like	8036566	3000181	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	AbrB/MazE/MraZ-like	8036566	3000181	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	AbrB/MazE/MraZ-like	8036566	3000181	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	AbrB/MazE/MraZ-like	8036566	3000181	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	AbrB/MazE/MraZ-like	8036566	3000181	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF02381	e1n0fA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: AbrB	F: PF02381	ECOD (1.6)
B	PF02381	e1n0fB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: AbrB	F: PF02381	ECOD (1.6)
C	PF02381	e1n0fC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: AbrB	F: PF02381	ECOD (1.6)
D	PF02381	e1n0fD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: AbrB	F: PF02381	ECOD (1.6)
E	PF02381	e1n0fE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: AbrB	F: PF02381	ECOD (1.6)
F	PF02381	e1n0fF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: AbrB	F: PF02381	ECOD (1.6)
G	PF02381	e1n0fG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: AbrB	F: PF02381	ECOD (1.6)
H	PF02381	e1n0fH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: AbrB	F: PF02381	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.1550.20	Alpha Beta	3-Layer(aba) Sandwich	Chemotaxis protein chec	Transcriptional regulator MraZ domain	CATH (4.3.0)
B	3.40.1550.20	Alpha Beta	3-Layer(aba) Sandwich	Chemotaxis protein chec	Transcriptional regulator MraZ domain	CATH (4.3.0)
C	3.40.1550.20	Alpha Beta	3-Layer(aba) Sandwich	Chemotaxis protein chec	Transcriptional regulator MraZ domain	CATH (4.3.0)
D	3.40.1550.20	Alpha Beta	3-Layer(aba) Sandwich	Chemotaxis protein chec	Transcriptional regulator MraZ domain	CATH (4.3.0)
E	3.40.1550.20	Alpha Beta	3-Layer(aba) Sandwich	Chemotaxis protein chec	Transcriptional regulator MraZ domain	CATH (4.3.0)
F	3.40.1550.20	Alpha Beta	3-Layer(aba) Sandwich	Chemotaxis protein chec	Transcriptional regulator MraZ domain	CATH (4.3.0)
G	3.40.1550.20	Alpha Beta	3-Layer(aba) Sandwich	Chemotaxis protein chec	Transcriptional regulator MraZ domain	CATH (4.3.0)
H	3.40.1550.20	Alpha Beta	3-Layer(aba) Sandwich	Chemotaxis protein chec	Transcriptional regulator MraZ domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF02381	MraZ protein, putative antitoxin-like (MraZ)	MraZ protein, putative antitoxin-like	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Protein mraZ	DNA binding binding organic cyclic compound binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	-	nucleoid cellular anatomical entity intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003444	Transcriptional regulator MraZ	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR038619	MraZ superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR037914	SpoVT-AbrB domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR007159	SpoVT-AbrB domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR035644	MraZ, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR020603	MraZ domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.