1MUU | pdb_00001muu

2.0 A crystal structure of GDP-mannose dehydrogenase


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd1muub1 All alpha proteins 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase dimerisation domain GDP-mannose 6-dehydrogenase, middle domain (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Bd1muub2 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase-like, N-terminal domain GDP-mannose 6-dehydrogenase (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Bd1muub3 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain UDP-glucose/GDP-mannose dehydrogenase C-terminal domain GDP-mannose 6-dehydrogenase, GDP-binding domain (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Cd1muuc1 All alpha proteins 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase dimerisation domain GDP-mannose 6-dehydrogenase, middle domain (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Cd1muuc2 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase-like, N-terminal domain GDP-mannose 6-dehydrogenase (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Cd1muuc3 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain UDP-glucose/GDP-mannose dehydrogenase C-terminal domain GDP-mannose 6-dehydrogenase, GDP-binding domain (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Dd1muud1 All alpha proteins 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase dimerisation domain GDP-mannose 6-dehydrogenase, middle domain (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Dd1muud2 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase-like, N-terminal domain GDP-mannose 6-dehydrogenase (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Dd1muud3 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain UDP-glucose/GDP-mannose dehydrogenase C-terminal domain GDP-mannose 6-dehydrogenase, GDP-binding domain (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Ad1muua1 All alpha proteins 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like UDP-glucose/GDP-mannose dehydrogenase dimerisation domain GDP-mannose 6-dehydrogenase, middle domain (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Ad1muua2 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains 6-phosphogluconate dehydrogenase-like, N-terminal domain GDP-mannose 6-dehydrogenase (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)
Ad1muua3 Alpha and beta proteins (a/b) Adenine nucleotide alpha hydrolase-like UDP-glucose/GDP-mannose dehydrogenase C-terminal domain UDP-glucose/GDP-mannose dehydrogenase C-terminal domain GDP-mannose 6-dehydrogenase, GDP-binding domain (Pseudomonas aeruginosa ) [TaxId: 287 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B Superfamily6-phosphogluconate dehydrogenase-like 8056192 3000048 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyUDP-glucose/GDP-mannose dehydrogenase C-terminal domain-like 8056193 3000011 SCOP2B (2022-06-29)
CSCOP2B Superfamily6-phosphogluconate dehydrogenase-like 8056192 3000048 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyUDP-glucose/GDP-mannose dehydrogenase C-terminal domain-like 8056193 3000011 SCOP2B (2022-06-29)
DSCOP2B Superfamily6-phosphogluconate dehydrogenase-like 8056192 3000048 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyUDP-glucose/GDP-mannose dehydrogenase C-terminal domain-like 8056193 3000011 SCOP2B (2022-06-29)
ASCOP2B Superfamily6-phosphogluconate dehydrogenase-like 8056192 3000048 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyUDP-glucose/GDP-mannose dehydrogenase C-terminal domain-like 8056193 3000011 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be1muuB1 A: alpha bundlesX: EGF-likeH: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1F:ECOD (develop294)
BFAD_binding_3e1muuB2 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (develop294)
BUspe1muuB3 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: UspECOD (develop294)
Ce1muuC1 A: alpha bundlesX: EGF-likeH: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1F:ECOD (develop294)
CFAD_binding_3e1muuC2 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (develop294)
CUspe1muuC3 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: UspECOD (develop294)
De1muuD1 A: alpha bundlesX: EGF-likeH: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1F:ECOD (develop294)
DFAD_binding_3e1muuD2 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (develop294)
DUspe1muuD3 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: UspECOD (develop294)
Ae1muuA1 A: alpha bundlesX: EGF-likeH: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1F:ECOD (develop294)
AFAD_binding_3e1muuA2 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (develop294)
AUspe1muuA3 A: alpha bundlesX: HTHH: HTHT: winged helix domainF: UspECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF03720UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain (UDPG_MGDP_dh_C)UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domainThe UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [2]. Domain
A, B, C, D
PF00984UDP-glucose/GDP-mannose dehydrogenase family, central domain (UDPG_MGDP_dh)UDP-glucose/GDP-mannose dehydrogenase family, central domainThe UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [2]. Domain
A, B, C, D
PF03721UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain (UDPG_MGDP_dh_N)UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domainThe UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
GDP-mannose 6-dehydrogenase -