Domain motions in GroEL upon binding of an oligopeptide
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Y [auth M] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| Y [auth M] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| Y [auth M] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| Y [auth M] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| Y [auth M] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| W [auth L] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| W [auth L] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| W [auth L] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| W [auth L] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| W [auth L] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| U [auth K] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| U [auth K] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| U [auth K] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| U [auth K] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| U [auth K] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| S [auth J] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| S [auth J] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| S [auth J] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| S [auth J] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| S [auth J] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| Q [auth I] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| Q [auth I] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| Q [auth I] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| Q [auth I] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| Q [auth I] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| O [auth H] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| O [auth H] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| O [auth H] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| O [auth H] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| O [auth H] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| M [auth G] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| M [auth G] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| M [auth G] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| M [auth G] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| M [auth G] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| K [auth F] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| K [auth F] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| K [auth F] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| K [auth F] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| K [auth F] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| I [auth E] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| I [auth E] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| I [auth E] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| I [auth E] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| I [auth E] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| G [auth D] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| G [auth D] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| G [auth D] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| G [auth D] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| G [auth D] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| AA [auth N] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| AA [auth N] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| AA [auth N] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| AA [auth N] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| AA [auth N] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Y [auth M] | e1mnfM1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| Y [auth M] | e1mnfM2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| Y [auth M] | e1mnfM3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| W [auth L] | e1mnfL1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| W [auth L] | e1mnfL2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| W [auth L] | e1mnfL3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| U [auth K] | e1mnfK1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| U [auth K] | e1mnfK2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| U [auth K] | e1mnfK3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| S [auth J] | e1mnfJ1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| S [auth J] | e1mnfJ2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| S [auth J] | e1mnfJ3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| Q [auth I] | e1mnfI1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| Q [auth I] | e1mnfI2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| Q [auth I] | e1mnfI3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| O [auth H] | e1mnfH1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| O [auth H] | e1mnfH2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| O [auth H] | e1mnfH3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| M [auth G] | e1mnfG1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| M [auth G] | e1mnfG2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| M [auth G] | e1mnfG3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| K [auth F] | e1mnfF1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| K [auth F] | e1mnfF2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| K [auth F] | e1mnfF3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| I [auth E] | e1mnfE1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| I [auth E] | e1mnfE2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| I [auth E] | e1mnfE3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| G [auth D] | e1mnfD1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| G [auth D] | e1mnfD2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| G [auth D] | e1mnfD3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| E [auth C] | e1mnfC1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| E [auth C] | e1mnfC2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| E [auth C] | e1mnfC3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| C [auth B] | e1mnfB1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| C [auth B] | e1mnfB2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| C [auth B] | e1mnfB3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| AA [auth N] | e1mnfN1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| AA [auth N] | e1mnfN2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| AA [auth N] | e1mnfN3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) | |
| A | e1mnfA1 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| A | e1mnfA2 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: C-terminal subdomain in Lon-related proteases catalytic domains | H: C-terminal subdomain in Lon-related proteases catalytic domains | T: DUF3197 | F: | ECOD (20:10:01) | |
| A | e1mnfA3 | A: HTH | X: HTH | H: winged helix domain | T: EF-hand_1, EF-hand_7 | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR027413 | GroEL-like equatorial domain superfamily | Homologous Superfamily | |
| IPR027410 | TCP-1-like chaperonin intermediate domain superfamily | Homologous Superfamily | |
| IPR001844 | Chaperonin Cpn60/GroEL | Family | |
| IPR018370 | Chaperonin Cpn60, conserved site | Conserved Site | |
| IPR027409 | GroEL-like apical domain superfamily | Homologous Superfamily | |
| IPR002423 | Chaperonin Cpn60/GroEL/TCP-1 family | Family |














