1MJG

CRYSTAL STRUCTURE OF BIFUNCTIONAL CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE(CODH/ACS) FROM MOORELLA THERMOACETICA (F. CLOSTRIDIUM THERMOACETICUM)


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1mjga_ Multi-domain proteins (alpha and beta) Prismane protein-like Prismane protein-like Carbon monoxide dehydrogenase Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Cd1mjgc_ Multi-domain proteins (alpha and beta) Prismane protein-like Prismane protein-like Carbon monoxide dehydrogenase Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Dd1mjgd_ Multi-domain proteins (alpha and beta) Prismane protein-like Prismane protein-like Carbon monoxide dehydrogenase Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
Bd1mjgb_ Multi-domain proteins (alpha and beta) Prismane protein-like Prismane protein-like Carbon monoxide dehydrogenase Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) beta (CODH) subunit (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
F [auth N]d1mjgn_ Multi-domain proteins (alpha and beta) Prismane protein-like Prismane protein-like Acetyl-CoA synthase Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
E [auth M]d1mjgm_ Multi-domain proteins (alpha and beta) Prismane protein-like Prismane protein-like Acetyl-CoA synthase Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
G [auth O]d1mjgo_ Multi-domain proteins (alpha and beta) Prismane protein-like Prismane protein-like Acetyl-CoA synthase Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)
H [auth P]d1mjgp_ Multi-domain proteins (alpha and beta) Prismane protein-like Prismane protein-like Acetyl-CoA synthase Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit (Moorella thermoacetica ) [TaxId: 1525 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPrismane protein N-terminal helical bundle-like8055590 3002294 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPrismane protein cluster-binding domain-like8055589 3001926 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPrismane protein cluster-binding domain-like8033918 3001926 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPrismane protein N-terminal helical bundle-like8055590 3002294 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPrismane protein cluster-binding domain-like8055589 3001926 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPrismane protein cluster-binding domain-like8033918 3001926 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPrismane protein cluster-binding domain-like8055589 3001926 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPrismane protein cluster-binding domain-like8033918 3001926 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPrismane protein N-terminal helical bundle-like8055590 3002294 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPrismane protein N-terminal helical bundle-like8055590 3002294 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPrismane protein cluster-binding domain-like8033918 3001926 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPrismane protein cluster-binding domain-like8055589 3001926 SCOP2B (2022-06-29)
F [auth N]SCOP2B SuperfamilyPrismane protein N-terminal helical bundle-like8055630 3002294 SCOP2B (2022-06-29)
F [auth N]SCOP2B SuperfamilyCdhC linker domain-like8055631 3002295 SCOP2B (2022-06-29)
F [auth N]SCOP2B SuperfamilyPrismane protein cluster-binding domain-like8033920 3001926 SCOP2B (2022-06-29)
F [auth N]SCOP2B SuperfamilyCdhC C-terminal domain-like8055632 3002296 SCOP2B (2022-06-29)
E [auth M]SCOP2B SuperfamilyPrismane protein cluster-binding domain-like8033920 3001926 SCOP2B (2022-06-29)
E [auth M]SCOP2B SuperfamilyCdhC C-terminal domain-like8055632 3002296 SCOP2B (2022-06-29)
E [auth M]SCOP2B SuperfamilyPrismane protein N-terminal helical bundle-like8055630 3002294 SCOP2B (2022-06-29)
E [auth M]SCOP2B SuperfamilyCdhC linker domain-like8055631 3002295 SCOP2B (2022-06-29)
G [auth O]SCOP2B SuperfamilyPrismane protein cluster-binding domain-like8033920 3001926 SCOP2B (2022-06-29)
G [auth O]SCOP2B SuperfamilyCdhC C-terminal domain-like8055632 3002296 SCOP2B (2022-06-29)
G [auth O]SCOP2B SuperfamilyCdhC linker domain-like8055631 3002295 SCOP2B (2022-06-29)
G [auth O]SCOP2B SuperfamilyPrismane protein N-terminal helical bundle-like8055630 3002294 SCOP2B (2022-06-29)
H [auth P]SCOP2B SuperfamilyPrismane protein cluster-binding domain-like8033920 3001926 SCOP2B (2022-06-29)
H [auth P]SCOP2B SuperfamilyPrismane protein N-terminal helical bundle-like8055630 3002294 SCOP2B (2022-06-29)
H [auth P]SCOP2B SuperfamilyCdhC C-terminal domain-like8055632 3002296 SCOP2B (2022-06-29)
H [auth P]SCOP2B SuperfamilyCdhC linker domain-like8055631 3002295 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF03063e1mjgA1 A: alpha bundlesX: Helical bundle domain in prismane-like proteins (From Topology)H: Helical bundle domain in prismane-like proteins (From Topology)T: Helical bundle domain in prismane-like proteinsF: PF03063ECOD (1.6)
APF03063e1mjgA4 A: a/b three-layered sandwichesX: Rossmann-like domain in prismane-like proteins (From Topology)H: Rossmann-like domain in prismane-like proteins (From Topology)T: Rossmann-like domain in prismane-like proteinsF: PF03063ECOD (1.6)
AF_UNCLASSIFIEDe1mjgA2 A: few secondary structure elementsX: Fe-binding domain in prismane-like proteins (From Topology)H: Fe-binding domain in prismane-like proteins (From Topology)T: Fe-binding domain in prismane-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
CPF03063e1mjgC1 A: alpha bundlesX: Helical bundle domain in prismane-like proteins (From Topology)H: Helical bundle domain in prismane-like proteins (From Topology)T: Helical bundle domain in prismane-like proteinsF: PF03063ECOD (1.6)
CPF03063e1mjgC4 A: a/b three-layered sandwichesX: Rossmann-like domain in prismane-like proteins (From Topology)H: Rossmann-like domain in prismane-like proteins (From Topology)T: Rossmann-like domain in prismane-like proteinsF: PF03063ECOD (1.6)
CF_UNCLASSIFIEDe1mjgC2 A: few secondary structure elementsX: Fe-binding domain in prismane-like proteins (From Topology)H: Fe-binding domain in prismane-like proteins (From Topology)T: Fe-binding domain in prismane-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
DPF03063e1mjgD1 A: alpha bundlesX: Helical bundle domain in prismane-like proteins (From Topology)H: Helical bundle domain in prismane-like proteins (From Topology)T: Helical bundle domain in prismane-like proteinsF: PF03063ECOD (1.6)
DPF03063e1mjgD4 A: a/b three-layered sandwichesX: Rossmann-like domain in prismane-like proteins (From Topology)H: Rossmann-like domain in prismane-like proteins (From Topology)T: Rossmann-like domain in prismane-like proteinsF: PF03063ECOD (1.6)
DF_UNCLASSIFIEDe1mjgD2 A: few secondary structure elementsX: Fe-binding domain in prismane-like proteins (From Topology)H: Fe-binding domain in prismane-like proteins (From Topology)T: Fe-binding domain in prismane-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
BPF03063e1mjgB1 A: alpha bundlesX: Helical bundle domain in prismane-like proteins (From Topology)H: Helical bundle domain in prismane-like proteins (From Topology)T: Helical bundle domain in prismane-like proteinsF: PF03063ECOD (1.6)
BPF03063e1mjgB4 A: a/b three-layered sandwichesX: Rossmann-like domain in prismane-like proteins (From Topology)H: Rossmann-like domain in prismane-like proteins (From Topology)T: Rossmann-like domain in prismane-like proteinsF: PF03063ECOD (1.6)
BF_UNCLASSIFIEDe1mjgB2 A: few secondary structure elementsX: Fe-binding domain in prismane-like proteins (From Topology)H: Fe-binding domain in prismane-like proteins (From Topology)T: Fe-binding domain in prismane-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
F [auth N]PF18537e1mjgN1 A: alpha bundlesX: Helical bundle domain in prismane-like proteins (From Topology)H: Helical bundle domain in prismane-like proteins (From Topology)T: Helical bundle domain in prismane-like proteinsF: PF18537ECOD (1.6)
F [auth N]PF03598e1mjgN2 A: a+b complex topologyX: first a+b domain in acetyl-CoA synthase (From Topology)H: first a+b domain in acetyl-CoA synthase (From Topology)T: first a+b domain in acetyl-CoA synthaseF: PF03598ECOD (1.6)
F [auth N]PF19436e1mjgN3 A: a+b complex topologyX: second a+b domain in acetyl-CoA synthase (From Topology)H: second a+b domain in acetyl-CoA synthase (From Topology)T: second a+b domain in acetyl-CoA synthaseF: PF19436ECOD (1.6)
F [auth N]F_UNCLASSIFIEDe1mjgN5 A: a/b three-layered sandwichesX: Rossmann-like domain in prismane-like proteins (From Topology)H: Rossmann-like domain in prismane-like proteins (From Topology)T: Rossmann-like domain in prismane-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
F [auth N]PF19436e1mjgN4 A: few secondary structure elementsX: Fe-binding domain in prismane-like proteins (From Topology)H: Fe-binding domain in prismane-like proteins (From Topology)T: Fe-binding domain in prismane-like proteinsF: PF19436ECOD (1.6)
E [auth M]PF18537e1mjgM1 A: alpha bundlesX: Helical bundle domain in prismane-like proteins (From Topology)H: Helical bundle domain in prismane-like proteins (From Topology)T: Helical bundle domain in prismane-like proteinsF: PF18537ECOD (1.6)
E [auth M]PF03598e1mjgM2 A: a+b complex topologyX: first a+b domain in acetyl-CoA synthase (From Topology)H: first a+b domain in acetyl-CoA synthase (From Topology)T: first a+b domain in acetyl-CoA synthaseF: PF03598ECOD (1.6)
E [auth M]PF19436e1mjgM3 A: a+b complex topologyX: second a+b domain in acetyl-CoA synthase (From Topology)H: second a+b domain in acetyl-CoA synthase (From Topology)T: second a+b domain in acetyl-CoA synthaseF: PF19436ECOD (1.6)
E [auth M]F_UNCLASSIFIEDe1mjgM5 A: a/b three-layered sandwichesX: Rossmann-like domain in prismane-like proteins (From Topology)H: Rossmann-like domain in prismane-like proteins (From Topology)T: Rossmann-like domain in prismane-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
E [auth M]PF19436e1mjgM4 A: few secondary structure elementsX: Fe-binding domain in prismane-like proteins (From Topology)H: Fe-binding domain in prismane-like proteins (From Topology)T: Fe-binding domain in prismane-like proteinsF: PF19436ECOD (1.6)
G [auth O]PF18537e1mjgO1 A: alpha bundlesX: Helical bundle domain in prismane-like proteins (From Topology)H: Helical bundle domain in prismane-like proteins (From Topology)T: Helical bundle domain in prismane-like proteinsF: PF18537ECOD (1.6)
G [auth O]PF03598e1mjgO2 A: a+b complex topologyX: first a+b domain in acetyl-CoA synthase (From Topology)H: first a+b domain in acetyl-CoA synthase (From Topology)T: first a+b domain in acetyl-CoA synthaseF: PF03598ECOD (1.6)
G [auth O]PF19436e1mjgO3 A: a+b complex topologyX: second a+b domain in acetyl-CoA synthase (From Topology)H: second a+b domain in acetyl-CoA synthase (From Topology)T: second a+b domain in acetyl-CoA synthaseF: PF19436ECOD (1.6)
G [auth O]F_UNCLASSIFIEDe1mjgO5 A: a/b three-layered sandwichesX: Rossmann-like domain in prismane-like proteins (From Topology)H: Rossmann-like domain in prismane-like proteins (From Topology)T: Rossmann-like domain in prismane-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
G [auth O]PF19436e1mjgO4 A: few secondary structure elementsX: Fe-binding domain in prismane-like proteins (From Topology)H: Fe-binding domain in prismane-like proteins (From Topology)T: Fe-binding domain in prismane-like proteinsF: PF19436ECOD (1.6)
H [auth P]PF18537e1mjgP1 A: alpha bundlesX: Helical bundle domain in prismane-like proteins (From Topology)H: Helical bundle domain in prismane-like proteins (From Topology)T: Helical bundle domain in prismane-like proteinsF: PF18537ECOD (1.6)
H [auth P]PF03598e1mjgP2 A: a+b complex topologyX: first a+b domain in acetyl-CoA synthase (From Topology)H: first a+b domain in acetyl-CoA synthase (From Topology)T: first a+b domain in acetyl-CoA synthaseF: PF03598ECOD (1.6)
H [auth P]PF19436e1mjgP3 A: a+b complex topologyX: second a+b domain in acetyl-CoA synthase (From Topology)H: second a+b domain in acetyl-CoA synthase (From Topology)T: second a+b domain in acetyl-CoA synthaseF: PF19436ECOD (1.6)
H [auth P]F_UNCLASSIFIEDe1mjgP5 A: a/b three-layered sandwichesX: Rossmann-like domain in prismane-like proteins (From Topology)H: Rossmann-like domain in prismane-like proteins (From Topology)T: Rossmann-like domain in prismane-like proteinsF: F_UNCLASSIFIEDECOD (1.6)
H [auth P]PF19436e1mjgP4 A: few secondary structure elementsX: Fe-binding domain in prismane-like proteins (From Topology)H: Fe-binding domain in prismane-like proteins (From Topology)T: Fe-binding domain in prismane-like proteinsF: PF19436ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.2030 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
A1.20.1270.30 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak Chain:ACATH (4.3.0)
C3.40.50.2030 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
C1.20.1270.30 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak Chain:ACATH (4.3.0)
D3.40.50.2030 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
D1.20.1270.30 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak Chain:ACATH (4.3.0)
B3.40.50.2030 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
B1.20.1270.30 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak Chain:ACATH (4.3.0)
F [auth N]1.10.8.190 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
F [auth N]3.40.50.2030 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
F [auth N]3.30.1650.10 Alpha Beta 2-Layer Sandwich Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3CATH (4.3.0)
F [auth N]3.40.970.20 Alpha Beta 3-Layer(aba) Sandwich Ribonuclease HI Chain ACATH (4.3.0)
F [auth N]3.40.1470.10 Alpha Beta 3-Layer(aba) Sandwich Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5CATH (4.3.0)
E [auth M]1.10.8.190 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
E [auth M]3.40.50.2030 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
E [auth M]3.30.1650.10 Alpha Beta 2-Layer Sandwich Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3CATH (4.3.0)
E [auth M]3.40.970.20 Alpha Beta 3-Layer(aba) Sandwich Ribonuclease HI Chain ACATH (4.3.0)
E [auth M]3.40.1470.10 Alpha Beta 3-Layer(aba) Sandwich Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5CATH (4.3.0)
G [auth O]1.10.8.190 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
G [auth O]3.40.50.2030 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
G [auth O]3.30.1650.10 Alpha Beta 2-Layer Sandwich Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3CATH (4.3.0)
G [auth O]3.40.970.20 Alpha Beta 3-Layer(aba) Sandwich Ribonuclease HI Chain ACATH (4.3.0)
G [auth O]3.40.1470.10 Alpha Beta 3-Layer(aba) Sandwich Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5CATH (4.3.0)
H [auth P]1.10.8.190 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
H [auth P]3.40.50.2030 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
H [auth P]3.30.1650.10 Alpha Beta 2-Layer Sandwich Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3CATH (4.3.0)
H [auth P]3.40.970.20 Alpha Beta 3-Layer(aba) Sandwich Ribonuclease HI Chain ACATH (4.3.0)
H [auth P]3.40.1470.10 Alpha Beta 3-Layer(aba) Sandwich Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5 Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 5CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF03063Prismane/CO dehydrogenase family (Prismane)Prismane/CO dehydrogenase family- Family
E [auth M],
F [auth N],
G [auth O],
H [auth P]
PF03598CO dehydrogenase/acetyl-CoA synthase complex beta subunit (CdhC)CO dehydrogenase/acetyl-CoA synthase complex beta subunit- Domain
E [auth M],
F [auth N],
G [auth O],
H [auth P]
PF19436ACS/CODH beta subunit C-terminal (ACS_CODH_B_C)ACS/CODH beta subunit C-terminalAcetyl-CoA synthase/CO dehydrogenase (ACS/CODH) is a bifunctional enzyme that catalyses the reversible reduction of CO2 to CO (CODH activity, the beta subunit) and the synthesis or degradation of acetyl-CoA (catalysed by ACS, the alpha subunit). CODH ...Acetyl-CoA synthase/CO dehydrogenase (ACS/CODH) is a bifunctional enzyme that catalyses the reversible reduction of CO2 to CO (CODH activity, the beta subunit) and the synthesis or degradation of acetyl-CoA (catalysed by ACS, the alpha subunit). CODH contains the B-, C-, and D-clusters. This domain represents the middle and C-terminal regions of CODH which have an alpha/beta Rossmann-like fold and are the contribute ligands to the active site C-cluster. The C-cluster generates CO from CO2 and contains one Ni atom, four Fe atoms, and five labile sulfur atoms, arranged as an asymmetrical heteronuclear [Ni-4Fe-5S] cluster [1,2,6,7].
Domain
E [auth M],
F [auth N],
G [auth O],
H [auth P]
PF18537Carbon monoxide dehydrogenase subunit alpha N-terminal domain (CODH_A_N)Carbon monoxide dehydrogenase subunit alpha N-terminal domainAcetyl-coenzyme A (CoA) synthase/carbon monoxide dehydrogenase (ACS/CODH) is a bifunctional enzyme that catalyzes the reversible reduction of CO2 to CO (CODH activity). This entry is for the N-terminal domain found in ACS/CODH subunit alpha [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
CARBON MONOXIDE DEHYDROGENASE BETA SUBUNIT -
E [auth M],
F [auth N],
G [auth O],
H [auth P]
Carbon monoxide dehydrogenase alpha subunit -