1MDM
INHIBITED FRAGMENT OF ETS-1 AND PAIRED DOMAIN OF PAX5 BOUND TO DNA
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1mdma1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Paired domain | Pax-5 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth B] | d1mdmb_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | ets domain | ETS-1 transcription factor, residues 331-440 | house mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Homeodomain-like | 8057626 | 3000001 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Homeodomain-like | 8057627 | 3000001 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8056283 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | PAX_C | e1mdmA2 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PAX_C | ECOD (1.6) |
C [auth A] | PAX_N | e1mdmA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PAX_N | ECOD (1.6) |
D [auth B] | Ets | e1mdmB1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: Ets | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
D [auth B] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
D [auth B] | PF00178 | Ets-domain (Ets) | Ets-domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
C [auth A] | IPR043182 | Paired DNA-binding domain | Domain |
C [auth A] | IPR043565 | PAX family | Family |
C [auth A] | IPR022130 | Paired-box protein 2 C-terminal | Domain |
C [auth A] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
C [auth A] | IPR001523 | Paired domain | Domain |
D [auth B] | IPR041886 | Protein C-ets-1, pointed domain | Domain |
D [auth B] | IPR045688 | Ets1, N-terminal flanking region of Ets domain | Domain |
D [auth B] | IPR013761 | Sterile alpha motif/pointed domain superfamily | Homologous Superfamily |
D [auth B] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
D [auth B] | IPR000418 | Ets domain | Domain |
D [auth B] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
D [auth B] | IPR016311 | Transforming protein C-ets | Family |
D [auth B] | IPR046328 | ETS family | Family |
D [auth B] | IPR003118 | Pointed domain | Domain |