1M5H | pdb_00001m5h

Formylmethanofuran:tetrahydromethanopterin formyltransferase from Archaeoglobus fulgidus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1m5hd1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
H	d1m5hh1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
G	d1m5hg1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
F	d1m5hf1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
E	d1m5he1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
C	d1m5hc1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
B	d1m5hb1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)
A	d1m5ha1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	Formylmethanofuran:tetrahydromethanopterin formyltransferase	(Archaeoglobus fulgidus ) [TaxId: 2234 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041626	3001339	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041623	3001339	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041623	3001339	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041626	3001339	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041623	3001339	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041626	3001339	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041626	3001339	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041623	3001339	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041623	3001339	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041626	3001339	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041623	3001339	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041626	3001339	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041623	3001339	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041626	3001339	SCOP2B (2022-06-29)
A	SCOP2 Family	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8029244	4001343	SCOP2 (2022-06-29)
A	SCOP2 Family	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8029247	4001343	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041623	3001339	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Formylmethanofuran:tetrahydromethanopterin formyltransferase	8041626	3001339	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	RNase_P_Rpp14	e1m5hD1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: RNase_P_Rpp14	ECOD (v294.1)
H	RNase_P_Rpp14	e1m5hH1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: RNase_P_Rpp14	ECOD (v294.1)
G	RNase_P_Rpp14	e1m5hG1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: RNase_P_Rpp14	ECOD (v294.1)
F	RNase_P_Rpp14	e1m5hF1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: RNase_P_Rpp14	ECOD (v294.1)
E	RNase_P_Rpp14	e1m5hE1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: RNase_P_Rpp14	ECOD (v294.1)
C	RNase_P_Rpp14	e1m5hC1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: RNase_P_Rpp14	ECOD (v294.1)
B	RNase_P_Rpp14	e1m5hB1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: RNase_P_Rpp14	ECOD (v294.1)
A	RNase_P_Rpp14	e1m5hA1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: Rpp14/Pop5-like	T: Rpp14/Pop5-like	F: RNase_P_Rpp14	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
H	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
G	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
F	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
E	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
C	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
B	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
A	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF01913	Formylmethanofuran-tetrahydromethanopterin formyltransferase (FTR)	Formylmethanofuran-tetrahydromethanopterin formyltransferase	This enzyme EC:2.3.1.101 is involved in archaebacteria in the formation of methane from carbon dioxide. N-terminal distal lobe of alpha+beta ferredoxin-like fold. SCOP reports fold duplication with C-terminal proximal lobe.	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	PF02741	FTR, proximal lobe (FTR_C)	FTR, proximal lobe	The FTR (Formylmethanofuran--tetrahydromethanopterin formyltransferase) enzyme EC:2.3.1.101 is involved in archaebacteria in the formation of methane from carbon dioxide. C-terminal proximal lobe of alpha+beta ferredoxin-like fold. SCOP reports fold ...	The FTR (Formylmethanofuran--tetrahydromethanopterin formyltransferase) enzyme EC:2.3.1.101 is involved in archaebacteria in the formation of methane from carbon dioxide. C-terminal proximal lobe of alpha+beta ferredoxin-like fold. SCOP reports fold duplication with N-terminal distal lobe.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Formylmethanofuran--tetrahydromethanopterin formyltransferase	formylmethanofuran-tetrahydromethanopterin N-formyltransferase activity acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity N-acyltransferase activity	oxoacid metabolic process carboxylic acid metabolic process small molecule metabolic process metabolic process cellular process monocarboxylic acid metabolic process organic acid metabolic process lactate metabolic process one-carbon metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR014053	Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR022667	Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR023447	Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, ferredoxin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR002770	Formylmethanofuran: tetrahydromethanopterin formyltransferase Ftr, C-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.