1M41 | pdb_00001m41

Crystal structure of Escherichia coli alkanesulfonate monooxygenase SsuD at 2.3 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1m41a_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Bacterial luciferase-like	Ssud-like monoxygenases	Alkanesulfonate monooxygenase SsuD	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1m41b_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Bacterial luciferase-like	Ssud-like monoxygenases	Alkanesulfonate monooxygenase SsuD	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Bacterial luciferase-like	8036904	3000585	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Bacterial luciferase-like	8036904	3000585	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF27526	e1m41A1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: PF27526	ECOD (v294.1)
B	PF27526	e1m41B1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: winged helix domain	F: PF27526	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.20.20.30	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Luciferase-like domain	CATH (4.3.0)
B	3.20.20.30	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Luciferase-like domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00296	Luciferase-like monooxygenase (Bac_luciferase)	Luciferase-like monooxygenase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	FMNH2-dependent alkanesulfonate monooxygenase	alkanesulfonate monooxygenase activity oxidoreductase activity monooxygenase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen catalytic activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen identical protein binding protein binding binding	protein-containing complex organization protein homotetramerization cellular component organization cellular component biogenesis cellular component assembly protein complex oligomerization protein tetramerization protein-containing complex assembly protein homooligomerization cellular process cellular component organization or biogenesis response to stimulus response to stress response to heat protein-containing complex organization protein homotetramerization cellular component organization cellular component biogenesis cellular component assembly protein complex oligomerization protein tetramerization protein-containing complex assembly protein homooligomerization cellular process cellular component organization or biogenesis response to stimulus response to stress response to heat response to abiotic stimulus response to temperature stimulus catabolic process organic acid metabolic process organic acid catabolic process sulfur compound catabolic process sulfur compound metabolic process metabolic process small molecule metabolic process alkanesulfonate catabolic process small molecule catabolic process alkanesulfonate metabolic process cellular response to stimulus cellular response to nutrient levels response to nutrient levels cellular response to stress response to starvation cellular response to starvation cellular response to sulfur starvation	protein-containing complex cellular anatomical structure intracellular anatomical structure catalytic complex oxidoreductase complex cytoplasm cytosol alkanesulfonate monooxygenase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR019911	Alkanesulphonate monooxygenase, FMN-dependent	Family
A, B	IPR050172	SsuD/RutA monooxygenase	Family
A, B	IPR011251	Luciferase-like domain	Domain
A, B	IPR036661	Luciferase-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.