1L8W | pdb_00001l8w

Crystal Structure of Lyme Disease Variable Surface Antigen VlsE of Borrelia burgdorferi

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1l8wd_	All alpha proteins	Variable surface antigen VlsE	Variable surface antigen VlsE	Variable surface antigen VlsE	Variable surface antigen VlsE	Lyme disease spirochete (Borreliella burgdorferi ) [TaxId: 139 ],	SCOPe (2.08)
C	d1l8wc_	All alpha proteins	Variable surface antigen VlsE	Variable surface antigen VlsE	Variable surface antigen VlsE	Variable surface antigen VlsE	Lyme disease spirochete (Borreliella burgdorferi ) [TaxId: 139 ],	SCOPe (2.08)
B	d1l8wb_	All alpha proteins	Variable surface antigen VlsE	Variable surface antigen VlsE	Variable surface antigen VlsE	Variable surface antigen VlsE	Lyme disease spirochete (Borreliella burgdorferi ) [TaxId: 139 ],	SCOPe (2.08)
A	d1l8wa_	All alpha proteins	Variable surface antigen VlsE	Variable surface antigen VlsE	Variable surface antigen VlsE	Variable surface antigen VlsE	Lyme disease spirochete (Borreliella burgdorferi ) [TaxId: 139 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Variable surface antigen VlsE	8041145	3000588	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Variable surface antigen VlsE	8041145	3000588	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Variable surface antigen VlsE	8041145	3000588	SCOP2B (2022-06-29)
A	SCOP2 Family	Variable surface antigen VlsE	8028766	4001946	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Variable surface antigen VlsE	8041145	3000588	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Lipoprotein_2_1	e1l8wD1	A: alpha arrays	X: Variable surface antigen VlsE (From Topology)	H: Variable surface antigen VlsE (From Topology)	T: Variable surface antigen VlsE	F: Lipoprotein_2_1	ECOD (1.6)
C	Lipoprotein_2_1	e1l8wC1	A: alpha arrays	X: Variable surface antigen VlsE (From Topology)	H: Variable surface antigen VlsE (From Topology)	T: Variable surface antigen VlsE	F: Lipoprotein_2_1	ECOD (1.6)
B	Lipoprotein_2_1	e1l8wB1	A: alpha arrays	X: Variable surface antigen VlsE (From Topology)	H: Variable surface antigen VlsE (From Topology)	T: Variable surface antigen VlsE	F: Lipoprotein_2_1	ECOD (1.6)
A	Lipoprotein_2_1	e1l8wA1	A: alpha arrays	X: Variable surface antigen VlsE (From Topology)	H: Variable surface antigen VlsE (From Topology)	T: Variable surface antigen VlsE	F: Lipoprotein_2_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00921	Borrelia lipoprotein (Lipoprotein_2)	Borrelia lipoprotein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	VlsE1	-	-	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR000680	Borrelia lipoprotein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.