1L7V
Bacterial ABC Transporter Involved in B12 Uptake
Present annotations:
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Product Annotation
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | FecCD-like | 8018501 | 4002900 | SCOP2 (2022-02-25) |
A | SCOP2 Superfamily | BtuC-like | 8018502 | 3000523 | SCOP2 (2022-02-25) |
B | SCOP2B Superfamily | BtuC-like | 8018502 | 3000523 | SCOP2B (2022-02-25) |
C | SCOP2 Family | ABC transporter ATPase domain-like | 8058247 | 4003976 | SCOP2 (2022-02-25) |
C | SCOP2 Superfamily | ABC transporter-like P-loop ATPases | 8058248 | 3002020 | SCOP2 (2022-02-25) |
D | SCOP2B Superfamily | ABC transporter-like P-loop ATPases | 8058248 | 3002020 | SCOP2B (2022-02-25) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FecCD_1 | e1l7vA1 | A: alpha bundles | X: Type II ABC importer transmembrane domain fold (From Topology) | H: Type II ABC importer transmembrane domain fold (From Topology) | T: Type II ABC importer transmembrane domain fold | F: FecCD_1 | ECOD (1.6) |
B | FecCD_1 | e1l7vB1 | A: alpha bundles | X: Type II ABC importer transmembrane domain fold (From Topology) | H: Type II ABC importer transmembrane domain fold (From Topology) | T: Type II ABC importer transmembrane domain fold | F: FecCD_1 | ECOD (1.6) |
C | ABC_tran | e1l7vC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
D | ABC_tran | e1l7vD1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.3470.10 | Mainly Alpha | Orthogonal Bundle | ABC transporter involved in vitamin B12 uptake, BtuC | ABC transporter involved in vitamin B12 uptake, BtuC | CATH (4.2.0) |
B | 1.10.3470.10 | Mainly Alpha | Orthogonal Bundle | ABC transporter involved in vitamin B12 uptake, BtuC | ABC transporter involved in vitamin B12 uptake, BtuC | CATH (4.2.0) |
C | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.2.0) |
D | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.2.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Identifier | Description | Comments | Source |
---|---|---|---|---|---|
A, B | PF01032 | FecCD transport family (FecCD) | FecCD transport family | - | Family |
C, D | PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |
Gene Product Annotation Gene Product Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | ABC transporters | FecCD transport family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | ATP Binding Cassette (ABC) Transporters | BtuCD Vitamin B12 Transporter |