1KOE | pdb_00001koe

ENDOSTATIN

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1koea_	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	Endostatin	Endostatin	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Endostatin	8024766	4002514	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	C-type lectin-like	8037145	3001261	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Endostatin_C	e1koeA1	A: a+b complex topology	X: C-type lectin-like (From Homology)	H: C-type lectin-like	T: C-type lectin-like	F: Endostatin_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.100.10	Alpha Beta	Roll	Mannose-Binding Protein A	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF06482	Collagenase NC10 and Endostatin (Endostatin)	Collagenase NC10 and Endostatin	NC10 stands for Non-helical region 10 and is taken from Swiss:P39059. A mutation in this region in Swiss:P39060 is associated with an increased risk of prostrate cancer. This domain is cleaved from the precursor and forms endostatin. Endostatin is a ...	NC10 stands for Non-helical region 10 and is taken from Swiss:P39059. A mutation in this region in Swiss:P39060 is associated with an increased risk of prostrate cancer. This domain is cleaved from the precursor and forms endostatin. Endostatin is a key tumour suppressor and has been used highly successfully to treat cancer. It is a potent angiogenesis inhibitor ([1]). Endostatin also binds a zinc ion near the N-terminus; this is likely to be of structural rather than functional importance according to ([2]).	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	ENDOSTATIN	cation binding ion binding binding metal ion binding small molecule binding	endothelial cell apoptotic process cellular process apoptotic process cell death programmed cell death developmental process epithelium development endothelial cell differentiation cellular developmental process endothelium development cell development tissue development epithelial cell differentiation cell morphogenesis endothelial cell apoptotic process cellular process apoptotic process cell death programmed cell death developmental process epithelium development endothelial cell differentiation cellular developmental process endothelium development cell development tissue development epithelial cell differentiation cell morphogenesis endothelial cell development anatomical structure morphogenesis epithelial cell development endothelial cell morphogenesis epithelial cell morphogenesis cell differentiation anatomical structure development cell population proliferation endothelial cell proliferation vascular endothelial cell proliferation epithelial cell proliferation multicellular organismal process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development multicellular organism development tube morphogenesis anatomical structure formation involved in morphogenesis blood vessel development system development cellular component organization extracellular matrix organization cellular component organization or biogenesis extracellular structure organization external encapsulating structure organization endothelial cell migration blood vessel endothelial cell migration cell migration cell motility positive regulation of locomotion regulation of biological process regulation of cell motility regulation of cellular process regulation of blood vessel endothelial cell migration biological regulation positive regulation of biological process positive regulation of cell migration positive regulation of blood vessel endothelial cell migration regulation of locomotion positive regulation of endothelial cell migration positive regulation of cell motility regulation of cell migration regulation of endothelial cell migration locomotion positive regulation of cellular process positive regulation of cell population proliferation positive regulation of epithelial cell proliferation regulation of vascular endothelial cell proliferation regulation of endothelial cell proliferation regulation of cell population proliferation positive regulation of endothelial cell proliferation regulation of epithelial cell proliferation positive regulation of vascular endothelial cell proliferation cell adhesion positive regulation of endothelial cell apoptotic process positive regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death positive regulation of apoptotic process regulation of endothelial cell apoptotic process	protein-containing complex collagen trimer basement membrane cell periphery extracellular matrix cellular anatomical structure external encapsulating structure extracellular region extracellular space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008160	Collagen triple helix repeat	Repeat
A	IPR036790	Frizzled cysteine-rich domain superfamily	Homologous Superfamily
A	IPR016187	C-type lectin fold	Homologous Superfamily
A	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A	IPR016186	C-type lectin-like/link domain superfamily	Homologous Superfamily
A	IPR010363	Domain of unknown function DUF959, collagen XVIII, N-terminal	Domain
A	IPR001791	Laminin G domain	Domain
A	IPR010515	Collagenase NC10/endostatin	Domain
A	IPR035523	Collagen alpha-1(XVIII) chain, frizzled domain	Domain
A	IPR048287	Thrombospondin-like, N-terminal domain	Domain
A	IPR045463	Collagen type XV/XVIII, trimerization domain	Domain
A	IPR050149	Collagen superfamily	Family
A	IPR020067	Frizzled domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.