Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyFPG N-terminal domain-like 8056354 3000074 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyS13-like H2TH domain 8056355 3000053 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8056356 3000068 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]Fapy_DNA_glycoe1k3xA1 A: beta barrelsX: MutM N-terminal domain-likeH: N-terminal domain of MutM-like DNA repair proteins (From Topology)T: N-terminal domain of MutM-like DNA repair proteinsF: Fapy_DNA_glycoECOD (1.6)
C [auth A]H2THe1k3xA2 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: H2THECOD (1.6)
C [auth A]zf-FPG_IleRSe1k3xA3 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: C-terminal, Zn-finger domain of MutM-like DNA repair proteins (From Topology)T: C-terminal, Zn-finger domain of MutM-like DNA repair proteinsF: zf-FPG_IleRSECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth A]3.20.190.10 Alpha Beta Alpha-Beta Barrel N-terminal domain of MutM-like DNA repair proteins MutM-like, N-terminalCATH (4.3.0)
C [auth A]1.10.8.50 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A]PF06827Zinc finger found in FPG and IleRS (zf-FPG_IleRS)Zinc finger found in FPG and IleRSThis zinc binding domain is found at the C-terminus of isoleucyl tRNA synthetase and the enzyme Formamidopyrimidine-DNA glycosylase EC:3.2.2.23.Domain
C [auth A]PF06831Formamidopyrimidine-DNA glycosylase H2TH domain (H2TH)Formamidopyrimidine-DNA glycosylase H2TH domainFormamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidised purines from damaged DNA. This family is the central domain containing the DNA-binding helix-two turn-helix domain [1].Domain
C [auth A]PF01149Formamidopyrimidine-DNA glycosylase N-terminal domain (Fapy_DNA_glyco)Formamidopyrimidine-DNA glycosylase N-terminal domainFormamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidised purines from damaged DNA. This family is the N-terminal domain contains eight beta-strands, forming a beta-sandwich with two alpha-helices parallel to its edges [1 ...Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidised purines from damaged DNA. This family is the N-terminal domain contains eight beta-strands, forming a beta-sandwich with two alpha-helices parallel to its edges [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]5'-D(*GP*GP*CP*(BRU)P*(BRU)P*CP*AP*(BRU)P*CP*CP*(BRU)P*GP*G)-3'---
B [auth C]5'-D(*CP*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3'---
C [auth A]Endonuclease VIII -

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth B]BRU Parent Component: DU

B [auth C]PED RESIDAA0494

PSI-MOD :  N-(DNA-1',2'-dideoxyribos-1'-ylidene)-L-prolinium MOD:01454