Annotations: 1JBI

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1jbia_	Alpha and beta proteins (a+b)	LCCL domain	LCCL domain	LCCL domain	Cochlin	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	LCCL domain	8024485	4003549	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	LCCL domain	8036864	3001037	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	LCCL	e1jbiA1	A: few secondary structure elements	X: LCCL domain	H: LCCL domain	T: LCCL domain	F: LCCL	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.170.130.20	Mainly Beta	Beta Complex	Ferric Hydroxamate Uptake Protein	Chain A, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF03815	LCCL domain (LCCL)	LCCL domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	cochlin	collagen binding protein-containing complex binding binding	developmental process regulation of biological process regulation of developmental process biological regulation regulation of cell shape cell morphogenesis regulation of cell morphogenesis anatomical structure morphogenesis anatomical structure development regulation of biological quality regulation of anatomical structure morphogenesis multicellular organismal process system process sensory perception developmental process regulation of biological process regulation of developmental process biological regulation regulation of cell shape cell morphogenesis regulation of cell morphogenesis anatomical structure morphogenesis anatomical structure development regulation of biological quality regulation of anatomical structure morphogenesis multicellular organismal process system process sensory perception nervous system process sensory perception of sound sensory perception of mechanical stimulus	extracellular matrix cellular anatomical structure external encapsulating structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036609	LCCL domain superfamily	Homologous Superfamily
A	IPR050525	Extracellular Matrix Assembly and Organization	Family
A	IPR002035	von Willebrand factor, type A	Domain
A	IPR004043	LCCL domain	Domain
A	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: O43405	nonsyndromic genetic deafness autosomal dominant nonsyndromic deafness 9 pancreatic ductal adenocarcinoma psoriasis adrenal cortex adenoma atopic eczema cystic fibrosis gastric carcinoma lung adenocarcinoma malignant ependymoma medulloblastoma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma subependymal giant cell astrocytoma adrenal cortex carcinoma nonsyndromic genetic deafness autosomal dominant nonsyndromic deafness 9 pancreatic ductal adenocarcinoma psoriasis adrenal cortex adenoma atopic eczema cystic fibrosis gastric carcinoma lung adenocarcinoma malignant ependymoma medulloblastoma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma subependymal giant cell astrocytoma adrenal cortex carcinoma atypical teratoid rhabdoid tumor Familial Ménière disease interstitial cystitis lung cancer malignant mesothelioma non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia astrocytic tumor gastric cancer large cell medulloblastoma lymphoplasmacytic lymphoma malignant pancreatic neoplasm

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.