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 1IVZ | pdb_00001ivz

Solution structure of the SEA domain from murine hypothetical protein homologous to human mucin 16

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1ivza1 Alpha and beta proteins (a+b) Ferredoxin-like SEA domain SEA domain SEA domain from the hypothetical protein homologous to mucin 16 house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad1ivza3 Artifacts Tags Tags Tags C-terminal Tags house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad1ivza2 Artifacts Tags Tags Tags N-terminal Tags house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilySEA domain 8030136 4003231 SCOP2 (2022-06-29)
ASCOP2 SuperfamilySEA domain 8042515 3000461 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASEAe1ivzA1 A: a+b two layersX: Alpha-beta plaitsH: SEA domainT: SEA domainF: SEAECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.960 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits SEA domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01390SEA domain (SEA)SEA domainDomain found in Sea urchin sperm protein, Enterokinase, Agrin (SEA). Proposed function of regulating or binding carbohydrate side chains. Recently a proteolytic activity has been shown for a SEA domain [4]. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036364SEA domain superfamilyHomologous Superfamily
IPR028850Mucin-16Family
IPR000082SEA domainDomain