1HVN | pdb_00001hvn

ZINC-AND SEQUENCE-DEPENDENT BINDING TO NUCLEIC ACIDS BY THE N-TERMINAL ZINC FINGER DOMAIN OF THE HIV-1 NUCLEOCAPSID PROTEIN: NMR STRUCTURE OF THE COMPLEX WITH THE PSI-SITE ANALOG, D/ACGCC

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth E]d1hvne_ Small proteins Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains Retrovirus zinc finger-like domains HIV nucleocapsid (Human immunodeficiency virus 1 ) [TaxId: 11676 ], SCOPe (2.08)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth E]Hiv-1 Nucleocapsid Zinc Finger
A [auth D]DNA (5'-D(P*AP*CP*GP*CP*C)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth E]IPR000071Immunodeficiency lentiviral matrix, N-terminalDomain
B [auth E]IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
B [auth E]IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
B [auth E]IPR050195Primate lentivirus group Gag polyprotein-likeDomain
B [auth E]IPR001878Zinc finger, CCHC-typeDomain
B [auth E]IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
B [auth E]IPR010999Retroviral matrix proteinHomologous Superfamily
B [auth E]IPR012344Matrix protein, lentiviral and alpha-retroviral, N-terminalHomologous Superfamily
B [auth E]IPR014817Gag protein p6Domain
B [auth E]IPR008916Retrovirus capsid, C-terminalHomologous Superfamily