1G1X
STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | Ribosomal_S6 | e1g1xA1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: Ribosomal_S6 | ECOD (1.6) |
H [auth F] | Ribosomal_S6 | e1g1xF1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: Ribosomal_S6 | ECOD (1.6) |
F [auth B] | Ribosomal_S15_1 | e1g1xB1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_1 | ECOD (1.6) |
I [auth G] | Ribosomal_S15_1 | e1g1xG1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_1 | ECOD (1.6) |
G [auth C] | Ribosomal_S18 | e1g1xC1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
J [auth H] | Ribosomal_S18 | e1g1xH1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth A] | 3.30.70.60 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Ribosomal protein S6/Translation elongation factor EF1B | CATH (4.3.0) |
H [auth F] | 3.30.70.60 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Ribosomal protein S6/Translation elongation factor EF1B | CATH (4.3.0) |
F [auth B] | 1.10.287.10 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | S15/NS1, RNA-binding | CATH (4.3.0) |
I [auth G] | 1.10.287.10 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | S15/NS1, RNA-binding | CATH (4.3.0) |
G [auth C] | 4.10.640.10 | Few Secondary Structures | Irregular | 30s Ribosomal Protein S18 | Ribosomal protein S18 | CATH (4.3.0) |
J [auth H] | 4.10.640.10 | Few Secondary Structures | Irregular | 30s Ribosomal Protein S18 | Ribosomal protein S18 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth A], H [auth F] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | - | Domain |
F [auth B], I [auth G] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | - | Domain |
G [auth C], J [auth H] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |