1FX0 | pdb_00001fx0

Crystal structure of the chloroplast F1-ATPase from spinach


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1fx0a1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 3 (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Ad1fx0a2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase alpha subunit, domain 1 (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Ad1fx0a3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of alpha subunit of F1 ATP synthase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Bd1fx0b1 All alpha proteins Left-handed superhelix C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases C-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 3 (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Bd1fx0b2 All beta proteins Domain of alpha and beta subunits of F1 ATP synthase-like N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases N-terminal domain of alpha and beta subunits of F1 ATP synthase F1 ATP synthase beta subunit, domain 1 (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Bd1fx0b3 Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Central domain of beta subunit of F1 ATP synthase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyATP synthase alpha/beta N-terminal domain-like 8056879 4002275 SCOP2 (2022-06-29)
ASCOP2 FamilyATP synthase nucleotide-binding domain-like 8056881 4004011 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyATP synthase alpha/beta N-terminal domain-like 8056880 3001034 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRecA-like P-loop NTPases 8056882 3002019 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyATP synthase alpha/beta C-terminal domain-like 8056883 3000684 SCOP2 (2022-06-29)
BSCOP2 FamilyATP synthase alpha/beta N-terminal domain-like 8056915 4002275 SCOP2 (2022-06-29)
BSCOP2 FamilyATP synthase nucleotide-binding domain-like 8056917 4004011 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyATP synthase alpha/beta N-terminal domain-like 8056916 3001034 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyRecA-like P-loop NTPases 8056918 3002019 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyATP synthase alpha/beta C-terminal domain-like 8056919 3000684 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AATP-synt_ab_Ne1fx0A1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
AATP-synt_ab_Ce1fx0A2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
AATP-synt_abe1fx0A3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)
BATP-synt_ab_Ne1fx0B1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: ATP-synt_ab_NECOD (1.6)
BATP-synt_ab_Ce1fx0B3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: ATP-synt_ab_CECOD (1.6)
BATP-synt_abe1fx0B2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ATP-synt_abECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. Domain
PF00306ATP synthase alpha/beta chain, C terminal domain (ATP-synt_ab_C)ATP synthase alpha/beta chain, C terminal domainDomain
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. Domain
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. Domain
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. Domain
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
ATP SYNTHASE ALPHA CHAIN
ATP SYNTHASE BETA CHAIN

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR038376ATP synthase, alpha subunit, C-terminal domain superfamilyHomologous Superfamily
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
IPR033732ATP synthase, F1 complex, alpha subunit nucleotide-binding domainDomain
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
IPR000793ATP synthase, alpha subunit, C-terminalDomain
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
IPR005294ATP synthase, F1 complex, alpha subunitFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
IPR050053ATPase alpha/beta chainsFamily
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
IPR055190ATP synthase A/B type, C-terminal domainDomain
IPR003593AAA+ ATPase domainDomain
IPR005722ATP synthase, F1 complex, beta subunitFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily