1FW5
SOLUTION STRUCTURE OF MEMBRANE BINDING PEPTIDE OF SEMLIKI FOREST VIRUS MRNA CAPPING ENZYME NSP1
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1fw5a_ | Peptides | Transmembrane helical fragments | Transmembrane helical fragments | Transmembrane helical fragments | Membrane binding peptide of semliki forest virus mRNA capping enzyme nsp1 | ( ) [TaxId: ], (Semliki forest virus ) [TaxId: 11033 ], | SCOPe (2.08) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01660 | Viral methyltransferase (Vmethyltransf) | Viral methyltransferase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR047311 | RNA-dependent RNA polymerase, togavirus | Domain | |
IPR048891 | Non-structural protein 3, zinc-binding domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR002589 | Macro domain | Domain | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR002620 | Alphavirus nsp2 protease domain | Domain | |
IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily | |
IPR001788 | RNA-dependent RNA polymerase, alsuviricetes | Domain | |
IPR002588 | Alphavirus-like methyltransferase domain | Domain | |
IPR043472 | Macro domain-like | Homologous Superfamily | |
IPR044936 | Alphavirus nsP2 protease domain superfamily | Homologous Superfamily | |
IPR049329 | Tomato mosaic virus helicase, N-terminal domain | Domain | |
IPR044371 | Non-structural protein 3, X-domain-like | Domain | |
IPR027351 | (+) RNA virus helicase core domain | Domain | |
IPR007094 | RNA-directed RNA polymerase, catalytic domain | Domain |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Peptides | Alpha-helical peptides | Viral fusion and anchor peptides | Membrane anchor domain of non-structural viral polyproteins |