Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyUndecaprenyl diphosphate synthase-like8020562 4003318 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyUndecaprenyl diphosphate synthase8032942 3000594 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyUndecaprenyl diphosphate synthase8032942 3000594 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APrenyltransfe1f75A1 A: a/b three-layered sandwichesX: Undecaprenyl diphosphate synthase (From Topology)H: Undecaprenyl diphosphate synthase (From Topology)T: Undecaprenyl diphosphate synthaseF: PrenyltransfECOD (1.6)
BPrenyltransfe1f75B1 A: a/b three-layered sandwichesX: Undecaprenyl diphosphate synthase (From Topology)H: Undecaprenyl diphosphate synthase (From Topology)T: Undecaprenyl diphosphate synthaseF: PrenyltransfECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01255Putative undecaprenyl diphosphate synthase (Prenyltransf)Putative undecaprenyl diphosphate synthase- Family

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific]  M-CSA #543

Undecaprenyl diphosphate synthases catalyse the sequential condensation of isopentyl diphosphate (IPP) with allylic disphosphates. The reaction generates linear prenyl diphosphates within the biosynthetic pathway of isoprenoid compounds; components which are essential to cell machinery such as cholesterol, carotenoids and dolichols. This reactions proceed through very similar mechanisms, although the enzymes differ with respect to the stereochemistry and chain length of their products. The enzyme in question is an example of the cis subclass.

Defined by 3 residues: ASP:A-29HIS:A-46LEU:A-140
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Explore in 3DM-CSA Motif Definition
Extent of motif is too large to support Structure Motif searching.
EC: 2.5.1.31 (PDB Primary Data)