1F1M | pdb_00001f1m

CRYSTAL STRUCTURE OF OUTER SURFACE PROTEIN C (OSPC)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1f1ma_	All alpha proteins	Four-helical up-and-down bundle	Outer surface protein C (OspC)	Outer surface protein C (OspC)	Outer surface protein C (OspC)	Lyme disease spirochete (Borreliella burgdorferi ) [TaxId: 139 ],	SCOPe (2.08)
B	d1f1mb_	All alpha proteins	Four-helical up-and-down bundle	Outer surface protein C (OspC)	Outer surface protein C (OspC)	Outer surface protein C (OspC)	Lyme disease spirochete (Borreliella burgdorferi ) [TaxId: 139 ],	SCOPe (2.08)
C	d1f1mc_	All alpha proteins	Four-helical up-and-down bundle	Outer surface protein C (OspC)	Outer surface protein C (OspC)	Outer surface protein C (OspC)	Lyme disease spirochete (Borreliella burgdorferi ) [TaxId: 139 ],	SCOPe (2.08)
D	d1f1md_	All alpha proteins	Four-helical up-and-down bundle	Outer surface protein C (OspC)	Outer surface protein C (OspC)	Outer surface protein C (OspC)	Lyme disease spirochete (Borreliella burgdorferi ) [TaxId: 139 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Outer surface protein C (OspC)	8020508	4002982	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Outer surface protein C (OspC)	8032888	3001976	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Outer surface protein C (OspC)	8032888	3001976	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Outer surface protein C (OspC)	8032888	3001976	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Outer surface protein C (OspC)	8032888	3001976	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Lipoprotein_6	e1f1mA1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Outer surface protein C (OspC) (From Topology)	T: Outer surface protein C (OspC)	F: Lipoprotein_6	ECOD (1.6)
B	Lipoprotein_6	e1f1mB1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Outer surface protein C (OspC) (From Topology)	T: Outer surface protein C (OspC)	F: Lipoprotein_6	ECOD (1.6)
C	Lipoprotein_6	e1f1mC1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Outer surface protein C (OspC) (From Topology)	T: Outer surface protein C (OspC)	F: Lipoprotein_6	ECOD (1.6)
D	Lipoprotein_6	e1f1mD1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Outer surface protein C (OspC) (From Topology)	T: Outer surface protein C (OspC)	F: Lipoprotein_6	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.120.240	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Lipoprotein, type 6	CATH (4.3.0)
B	1.20.120.240	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Lipoprotein, type 6	CATH (4.3.0)
C	1.20.120.240	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Lipoprotein, type 6	CATH (4.3.0)
D	1.20.120.240	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)	Lipoprotein, type 6	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01441	Lipoprotein (Lipoprotein_6)	Lipoprotein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	OUTER SURFACE PROTEIN C	cation binding ion binding binding metal ion binding small molecule binding	-	cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001800	Lipoprotein, OspC-type	Family
A, B, C, D	IPR036437	Outer surface protein C-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.