1EVY | pdb_00001evy

CRYSTAL STRUCTURE OF LEISHMANIA MEXICANA GLYCEROL-3-PHOSPHATE DEHYDROGENASE


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B Superfamily6-phosphogluconate dehydrogenase-like 8058538 3000048 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANAD_Gly3P_dh_Ce1evyA1 A: alpha arraysX: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology)H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology)T: 6-phosphogluconate dehydrogenase C-terminal domain-likeF: NAD_Gly3P_dh_CECOD (1.6)
ANAD_Gly3P_dh_Ne1evyA2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: NAD_Gly3P_dh_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A1.10.1040.10 Mainly Alpha Orthogonal Bundle N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase domain 2CATH (4.3.0)

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
glycerol-3-phosphate dehydrogenase (NAD+)  M-CSA #593

Glycerol-3-phosphate dehydrogenase catalyses the interconversion of glycerol-3-phosphate (G3P) and Dihydroxyacetone-3-phosphate (DHAP), which is vital in the mitochondrial NAD/NADH shuttle. The dehydrogenase isolated from Leishmania mexicana (trypanosome) displays little sequence homology with the human system, thus may be a target for drug design.

Defined by 2 residues: LYS:A-210THR:A-267
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