STRUCTURE OF THE FAB FRAGMENT FROM A HUMAN IGM COLD AGGLUTININ
External Resource: Annotation
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
| D | d1dn0d1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | Immunoglobulin heavy chain variable domain, VH | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| D | d1dn0d2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | Immunoglobulin heavy chain mu constant domain 1, CH1-mu | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| B | d1dn0b1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | Immunoglobulin heavy chain variable domain, VH | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| B | d1dn0b2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | Immunoglobulin heavy chain mu constant domain 1, CH1-mu | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| C | d1dn0c1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | Immunoglobulin light chain kappa variable domain, VL-kappa | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| C | d1dn0c2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | Immunoglobulin light chain kappa constant domain, CL-kappa | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| A | d1dn0a1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | Immunoglobulin light chain kappa variable domain, VL-kappa | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| A | d1dn0a2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | Immunoglobulin light chain kappa constant domain, CL-kappa | (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
| D | Copper-bind | e1dn0D1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Copper-bind | ECOD (develop294) |
| B | C1-set | e1dn0B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set | ECOD (develop294) |
| B | Copper-bind | e1dn0B1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Copper-bind | ECOD (develop294) |
| C | Copper-bind | e1dn0C1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Copper-bind | ECOD (develop294) |
| A | Copper-bind | e1dn0A1 | A: alpha bundles | X: Cloacin translocation domain | H: beta-Prism I | T: beta-Prism I | F: Copper-bind | ECOD (develop294) |
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|
| | Igm-Kappa Cold Agglutinin (Heavy Chain) | VH-CH1 | Homo sapiens (human) | IGHV4-34*01, IGHV4-34*02, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHM*03 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-MU_KAPPA | IMGT (202610-0) |
| | Igm-Kappa Cold Agglutinin (Heavy Chain) | L-KAPPA | Homo sapiens (human) | IGKV3D-20*01, IGKJ4*01, IGKJ4*02, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-MU_KAPPA | IMGT (202610-0) |
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|
| | Heavy Chain | IGHV4 | - | - | SAbDab (2026-03-20) |
| | Light Chain | IGKV3D | Kappa | - | SAbDab (2026-03-20) |
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|
| IGM-KAPPA COLD AGGLUTININ (HEAVY CHAIN) | - | - | - |
| IGM-KAPPA COLD AGGLUTININ (LIGHT CHAIN) | - | | |