Annotations: 1DM5

ANNEXIN XII E105K HOMOHEXAMER CRYSTAL STRUCTURE

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1dm5a_	All alpha proteins	Annexin	Annexin	Annexin	Annexin XII	(Hydra vulgaris ) [TaxId: 6087 ],	SCOPe (2.08)
E	d1dm5e_	All alpha proteins	Annexin	Annexin	Annexin	Annexin XII	(Hydra vulgaris ) [TaxId: 6087 ],	SCOPe (2.08)
F	d1dm5f_	All alpha proteins	Annexin	Annexin	Annexin	Annexin XII	(Hydra vulgaris ) [TaxId: 6087 ],	SCOPe (2.08)
D	d1dm5d_	All alpha proteins	Annexin	Annexin	Annexin	Annexin XII	(Hydra vulgaris ) [TaxId: 6087 ],	SCOPe (2.08)
C	d1dm5c_	All alpha proteins	Annexin	Annexin	Annexin	Annexin XII	(Hydra vulgaris ) [TaxId: 6087 ],	SCOPe (2.08)
B	d1dm5b_	All alpha proteins	Annexin	Annexin	Annexin	Annexin XII	(Hydra vulgaris ) [TaxId: 6087 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Annexin	8025425	4001063	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Annexin	8037804	3000627	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	Annexin	8037804	3000627	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Annexin	8037804	3000627	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Annexin	8037804	3000627	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Annexin	8037804	3000627	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Annexin	8037804	3000627	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Tubulin	e1dm5A2	A: beta barrels	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Tubulin	ECOD (v294.2)
E	Tubulin	e1dm5E2	A: beta barrels	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Tubulin	ECOD (v294.2)
F	Tubulin	e1dm5F2	A: beta barrels	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Tubulin	ECOD (v294.2)
D	Tubulin	e1dm5D2	A: beta barrels	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Tubulin	ECOD (v294.2)
C	Tubulin	e1dm5C2	A: beta barrels	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Tubulin	ECOD (v294.2)
B	Tubulin	e1dm5B2	A: beta barrels	X: POZ domain	H: Rossmann-related	T: S-adenosyl-L-methionine-dependent methyltransferases	F: Tubulin	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.220.10	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (4.3.0)
E	1.10.220.10	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (4.3.0)
F	1.10.220.10	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (4.3.0)
D	1.10.220.10	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (4.3.0)
C	1.10.220.10	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (4.3.0)
B	1.10.220.10	Mainly Alpha	Orthogonal Bundle	Annexin V	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF00191	Annexin (Annexin)	Annexin	This family of annexins also includes giardin that has been shown to function as an annexin [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	ANNEXIN XII E105K MUTANT HOMOHEXAMER	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding calcium-dependent phospholipid binding phospholipid binding lipid binding modified amino acid binding anion binding phosphatidylserine binding	-	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm membrane-bounded organelle vesicle membrane organelle vesicle organelle membrane intracellular organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR018502	Annexin repeat	Repeat
A, B, C, D, E A, B, C, D, E, F	IPR001464	Annexin	Family
A, B, C, D, E A, B, C, D, E, F	IPR018252	Annexin repeat, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F	IPR037104	Annexin superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.