1DFM
Crystal structure of restriction endonuclease BGLII complexed with DNA 16-mer
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1dfma_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease BglII | Restriction endonuclease BglII | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
D [auth B] | d1dfmb_ | Alpha and beta proteins (a/b) | Restriction endonuclease-like | Restriction endonuclease-like | Restriction endonuclease BglII | Restriction endonuclease BglII | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2 Family | Restriction endonuclease BglII | 8032058 | 4000534 | SCOP2 (2022-06-29) |
C [auth A] | SCOP2 Superfamily | Restriction endonuclease-like | 8044436 | 3000104 | SCOP2 (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Restriction endonuclease-like | 8044436 | 3000104 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | F_UNCLASSIFIED | e1dfmA1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth B] | F_UNCLASSIFIED | e1dfmB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 3.40.91.20 | Alpha Beta | 3-Layer(aba) Sandwich | Restriction Endonuclease | CATH (4.3.0) | |
D [auth B] | 3.40.91.20 | Alpha Beta | 3-Layer(aba) Sandwich | Restriction Endonuclease | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily |
C [auth A], D [auth B] | IPR011338 | Restriction endonuclease, type II, BamHI/BglIII/BstY | Homologous Superfamily |