CRYSTAL STRUCTURE OF A BACTERIAL CHITINASE AT 2.3 ANGSTROMS RESOLUTION
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1ctna1 | All beta proteins | Immunoglobulin-like beta-sandwich | E set domains | E-set domains of sugar-utilizing enzymes | Chitinase A, N-terminal domain N | (Serratia marcescens ) [TaxId: 615 ], | SCOPe (2.08) |
| A | d1ctna2 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | Type II chitinase | Chitinase A, catalytic domain | (Serratia marcescens ) [TaxId: 615 ], | SCOPe (2.08) |
| A | d1ctna3 | Alpha and beta proteins (a+b) | FKBP-like | Chitinase insertion domain | Chitinase insertion domain | Chitinase A | (Serratia marcescens ) [TaxId: 615 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2B Superfamily | (Trans)glycosidases | 8055440 | 3000313 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | E set domains | 8054947 | 3000070 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | (Trans)glycosidases | 8055440 | 3000313 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Chitinase insertion domain | 8055442 | 3000666 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Copper-bind | e1ctnA1 | A: a/b three-layered sandwiches | X: Phage tail fiber protein trimerization domain | H: beta-Prism I | T: beta-Prism I | F: Copper-bind | ECOD (v294.1) |
| A | Glyco_hydro_18 | e1ctnA2 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Glyco_hydro_18 | ECOD (v294.1) |
| A | DUF711 | e1ctnA3 | A: a/b three-layered sandwiches | X: HTH | H: HTH | T: winged helix domain | F: DUF711 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| A | 3.10.50.10 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029070 | Chitinase insertion domain superfamily | Homologous Superfamily | |
| IPR022409 | PKD/Chitinase domain | Domain | |
| IPR050314 | Glycosyl hydrolase family 18 | Family | |
| IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
| IPR001579 | Glycosyl hydrolase family 18, active site | Active Site | |
| IPR001223 | Glycoside hydrolase family 18, catalytic domain | Domain | |
| IPR013540 | Chitinase A N-terminal | Domain | |
| IPR011583 | Chitinase II/V-like, catalytic domain | Domain | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR014756 | Immunoglobulin E-set | Homologous Superfamily |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
| Chains | Enzyme Name | Description | Catalytic Residues |
|---|---|---|---|
| chitinase (GH18, Class II) M-CSA #478 | Chitinase binds to chitin and randomly cleaves glycosidic linkages in chitin and chitodextrins in a non-processive mode, generating chitooligosaccharides and free ends on which exo-chitinases and exo-chitodextrinases can act. Chitin is a bio-polymer composed of 1,4-beta linked N-acetylglucosamine units, a major component of fungal cell walls and insect exoskeletons. | Defined by 4 residues: ASP:A-288 [auth A-311]ASP:A-290 [auth A-313]GLU:A-292 [auth A-315]TYR:A-367 [auth A-390] | EC: 3.2.1.14 (PDB Primary Data) |














