1CDG | pdb_00001cdg

NUCLEOTIDE SEQUENCE AND X-RAY STRUCTURE OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 IN A MALTOSE-DEPENDENT CRYSTAL FORM


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyE set domains 8054905 3000070 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyStarch-binding domain-like 8040267 3000816 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGlycosyl hydrolase domain-like 8042883 3001528 SCOP2B (2022-06-29)
ASCOP2B Superfamily(Trans)glycosidases 8043311 3000313 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATIG_2e1cdgA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: TIG_2ECOD (1.6)
ACBM_20e1cdgA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Prealbumin-likeF: CBM_20ECOD (1.6)
AAlpha-amylase_Ce1cdgA3 A: beta sandwichesX: Glycosyl hydrolase domain-likeH: Glycosyl hydrolase domain (From Topology)T: Glycosyl hydrolase domainF: Alpha-amylase_CECOD (1.6)
AAlpha-amylasee1cdgA4 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Alpha-amylaseECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.80 Alpha Beta Alpha-Beta Barrel TIM Barrel GlycosidasesCATH (4.3.0)
A2.60.40.1180 Mainly Beta Sandwich Immunoglobulin-like Golgi alpha-mannosidase IICATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
cyclomaltodextrin glucanotransferase  M-CSA #45

Cyclodextrin glycosyltransferases (CGTases) are industrially important enzymes that produce cyclodextrins from starch by intramolecular transglycosylation. They belong to the important alpha-amylase family (family 13) of glycosyl hydrolases and catalyse the cyclisation of part of a (1->4)-alpha-D-glucan chain by the formation of a (1->4)-alpha-D-glucosidic bond. This enzyme also acts as a hydrolase or a transglycosylase, depending on the identity of the acceptor molecule in the final stages of the reaction.

Defined by 5 residues: ARG:A-227ASP:A-229GLU:A-257HIS:A-327ASP:A-328
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Explore in 3DM-CSA Motif Definition