1BOE | pdb_00001boe

STRUCTURE OF THE IGF BINDING DOMAIN OF THE INSULIN-LIKE GROWTH FACTOR-BINDING PROTEIN-5 (IGFBP-5): IMPLICATIONS FOR IGF AND IGF-I RECEPTOR INTERACTIONS

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1boea_	Small proteins	Knottins (small inhibitors, toxins, lectins)	Growth factor receptor domain	Growth factor receptor domain	Insulin-like growth factor-binding protein-5 (IGFBP-5)	(Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Growth factor receptor domain-like	8039411	3000398	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Peptidase_M9	e1boeA2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: Peptidase_M9	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	4.10.40.20	Few Secondary Structures	Irregular	Omega-AgatoxinV		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00219	Insulin-like growth factor binding protein (IGFBP)	Insulin-like growth factor binding protein		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	PROTEIN (INSULIN-LIKE GROWTH FACTOR-BINDING PROTEIN-5 (IGFBP-5))	molecular function activator activity molecular function regulator activity signaling receptor regulator activity receptor ligand activity signaling receptor activator activity insulin-like growth factor binding protein binding binding insulin-like growth factor II binding growth factor binding insulin-like growth factor I binding fibronectin binding	developmental process multicellular organismal process cellular developmental process ossification cell differentiation cellular process osteoblast differentiation regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process developmental process multicellular organismal process cellular developmental process ossification cell differentiation cellular process osteoblast differentiation regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process negative regulation of locomotion regulation of cell motility regulation of smooth muscle cell migration smooth muscle cell migration muscle cell migration negative regulation of smooth muscle cell migration regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility locomotion negative regulation of cell migration multi-multicellular organism process reproductive process female pregnancy multi-organism reproductive process regulation of muscle tissue development regulation of developmental process negative regulation of developmental process negative regulation of muscle tissue development tissue development anatomical structure development muscle tissue development regulation of osteoblast differentiation negative regulation of osteoblast differentiation regulation of cell differentiation negative regulation of cell differentiation mammary gland morphogenesis mammary gland development gland development animal organ development anatomical structure morphogenesis gland morphogenesis tissue remodeling mammary gland involution animal organ morphogenesis cell population proliferation negative regulation of cell population proliferation regulation of smooth muscle cell proliferation smooth muscle cell proliferation negative regulation of smooth muscle cell proliferation regulation of cell population proliferation muscle cell proliferation regulation of vascular associated smooth muscle cell proliferation positive regulation of vascular associated smooth muscle cell proliferation positive regulation of cell population proliferation positive regulation of biological process positive regulation of smooth muscle cell proliferation vascular associated smooth muscle cell proliferation positive regulation of cellular process regulation of growth regulation of cellular component organization growth regulation of cell growth cell growth cellular component organization cellular component organization or biogenesis cellular response to stimulus positive regulation of cell communication regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of signal transduction response to stimulus signaling regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction regulation of signaling positive regulation of intracellular signal transduction positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction regulation of response to stimulus regulation of cell communication phosphatidylinositol 3-kinase/protein kinase B signal transduction positive regulation of signaling cellular response to nitrogen compound response to organophosphorus response to oxygen-containing compound response to nitrogen compound response to purine-containing compound response to cAMP cellular response to oxygen-containing compound cellular response to chemical stimulus response to chemical cellular response to cAMP epithelium development epidermis development molting cycle process hair cycle epidermis morphogenesis morphogenesis of an epithelium tissue morphogenesis skin development skin epidermis development hair follicle development molting cycle hair cycle process hair follicle morphogenesis cell surface receptor signaling pathway insulin-like growth factor receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway enzyme-linked receptor protein signaling pathway regulation of vascular associated smooth muscle cell migration positive regulation of locomotion vascular associated smooth muscle cell migration positive regulation of smooth muscle cell migration positive regulation of cell migration positive regulation of cell motility positive regulation of vascular associated smooth muscle cell migration positive regulation of insulin-like growth factor receptor signaling pathway regulation of insulin-like growth factor receptor signaling pathway type B pancreatic cell proliferation epithelial cell proliferation response to growth hormone response to hormone response to endogenous stimulus response to peptide hormone negative regulation of signaling negative regulation of cell communication negative regulation of response to stimulus negative regulation of insulin-like growth factor receptor signaling pathway negative regulation of signal transduction muscle structure development striated muscle cell differentiation muscle cell differentiation negative regulation of growth negative regulation of muscle adaptation system process striated muscle adaptation negative regulation of muscle hypertrophy regulation of system process regulation of muscle hypertrophy muscle adaptation regulation of skeletal muscle hypertrophy negative regulation of skeletal muscle hypertrophy regulation of multicellular organismal process muscle hypertrophy regulation of muscle adaptation regulation of skeletal muscle adaptation striated muscle hypertrophy regulation of muscle system process muscle system process skeletal muscle adaptation negative regulation of multicellular organismal process skeletal muscle hypertrophy chemical homeostasis homeostatic process glucose homeostasis carbohydrate homeostasis tube development respiratory tube development multicellular organism development lung development respiratory system development lung alveolus development system development	protein-containing complex cellular anatomical structure extracellular region extracellular space insulin-like growth factor binding protein complex growth factor complex insulin-like growth factor ternary complex membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen protein-containing complex cellular anatomical structure extracellular region extracellular space insulin-like growth factor binding protein complex growth factor complex insulin-like growth factor ternary complex membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle organelle lumen organelle endoplasmic reticulum cytoplasm nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036857	Thyroglobulin type-1 superfamily	Homologous Superfamily
A	IPR000867	Insulin-like growth factor-binding protein, IGFBP	Domain
A	IPR022321	Insulin-like growth factor-binding protein family 1-6, chordata	Family
A	IPR009030	Growth factor receptor cysteine-rich domain superfamily	Homologous Superfamily
A	IPR012213	Insulin-like growth factor binding protein 5	Family
A	IPR017891	Insulin-like growth factor binding protein, N-terminal, Cys-rich conserved site	Conserved Site
A	IPR000716	Thyroglobulin type-1	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P24593	Weight Gain breast carcinoma urinary bladder cancer large cell medulloblastoma malignant glioma malignant pancreatic neoplasm adrenal cortex carcinoma non-small cell lung carcinoma atopic eczema pancreatic ductal adenocarcinoma breast cancer pituitary cancer Crohn disease ulcerative colitis Down syndrome Weight Gain breast carcinoma urinary bladder cancer large cell medulloblastoma malignant glioma malignant pancreatic neoplasm adrenal cortex carcinoma non-small cell lung carcinoma atopic eczema pancreatic ductal adenocarcinoma breast cancer pituitary cancer Crohn disease ulcerative colitis Down syndrome glioblastoma interstitial lung disease limb-girdle muscular dystrophy malignant mesothelioma MALT lymphoma medulloblastoma amyotrophic lateral sclerosis osteosarcoma atypical teratoid rhabdoid tumor pancreatic intraductal papillary-mucinous carcinoma primitive neuroectodermal tumor cystic fibrosis ductal breast carcinoma in situ hypothyroidism invasive ductal breast carcinoma malignant ependymoma nephrosclerosis astrocytic tumor ovarian cancer Becker muscular dystrophy pilocytic astrocytoma carcinoma of esophagus psoriasis dermatomyositis urinary bladder neoplasm Emery-Dreifuss muscular dystrophy interstitial cystitis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.