Annotations: 12DU

In situ cryo-EM structure of the flagellar export gate in complex with the FliF RBM12 ring in Borrelia burgdorferi

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], F [auth h], G [auth i], H [auth j], I [auth k], J [auth l], K [auth m], L [auth n], M [auth o], N [auth p], O [auth q], P [auth r], Q [auth s], R [auth t], S [auth u], T [auth v], U [auth w], V [auth x], W [auth y]	Flagellar M-ring protein	cytoskeletal motor activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cell periphery cellular anatomical structure plasma membrane membrane bacterial-type flagellum basal body cell projection bacterial-type flagellum basal body, MS ring organelle membraneless organelle bacterial-type flagellum
X [auth A]	Flagellar biosynthetic protein FlhB	-	organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly establishment of protein localization transport organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane
AA [auth H], BA [auth I], CA [auth J], Y [auth F], Z [auth G]	Flagellar biosynthetic protein FliP	-	cellular component organization bacterial-type flagellum organization organelle organization cell projection organization cellular process cellular component organization or biogenesis establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region cellular component organization bacterial-type flagellum organization organelle organization cell projection organization cellular process cellular component organization or biogenesis establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane bacterial-type flagellum basal body cell projection organelle membraneless organelle bacterial-type flagellum
EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q]	Flagellar hook-basal body complex protein FliE	cytoskeletal motor activity structural molecule activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum basal body cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum
KA [auth R], LA [auth S], MA [auth T], NA [auth U], OA [auth V]	Flagellar basal body rod protein FlgB	-	bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum basal body cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum basal body, rod bacterial-type flagellum
VA [auth z], WA [auth 1], XA [auth 2], YA [auth 3]	Flagellar biosynthetic protein FliQ	-	organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly establishment of protein localization transport organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane bacterial-type flagellum basal body cell projection organelle membraneless organelle bacterial-type flagellum
PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], UA [auth b]	Flagellar basal-body rod protein FlgC	-	bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum basal body cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum basal body, rod bacterial-type flagellum
DA [auth K]	Flagellar biosynthetic protein FliR	-	organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly localization establishment of protein localization organelle assembly cell projection organization bacterial-type flagellum assembly membraneless organelle assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly localization establishment of protein localization protein targeting establishment of localization	cell periphery cellular anatomical structure plasma membrane membrane bacterial-type flagellum basal body cell projection organelle membraneless organelle bacterial-type flagellum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], F [auth h], G [auth i], H [auth j], I [auth k], J [auth l], K [auth m], L [auth n], M [auth o], N [auth p], O [auth q], P [auth r], Q [auth s], R [auth t], S [auth u], T [auth v], U [auth w], V [auth x], W [auth y]	IPR006182	Flagellar M-ring, N-terminal	Domain
A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], F [auth h], G [auth i], H [auth j], I [auth k], J [auth l], K [auth m], L [auth n], M [auth o], N [auth p], O [auth q], P [auth r], Q [auth s], R [auth t], S [auth u], T [auth v], U [auth w], V [auth x], W [auth y]	IPR045851	AMP-binding enzyme domain superfamily	Homologous Superfamily
A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], F [auth h], G [auth i], H [auth j], I [auth k], J [auth l], K [auth m], L [auth n], M [auth o], N [auth p], O [auth q], P [auth r], Q [auth s], R [auth t], S [auth u], T [auth v], U [auth w], V [auth x], W [auth y]	IPR013556	Flagellar M-ring C-terminal	Domain
A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], F [auth h], G [auth i], H [auth j], I [auth k], J [auth l], K [auth m], L [auth n], M [auth o], N [auth p], O [auth q], P [auth r], Q [auth s], R [auth t], S [auth u], T [auth v], U [auth w], V [auth x], W [auth y]	IPR043427	Lipoprotein YscJ/Flagellar M-ring protein	Family
A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], A [auth c], B [auth d], C [auth e], D [auth f], E [auth g], F [auth h], G [auth i], H [auth j], I [auth k], J [auth l], K [auth m], L [auth n], M [auth o], N [auth p], O [auth q], P [auth r], Q [auth s], R [auth t], S [auth u], T [auth v], U [auth w], V [auth x], W [auth y]	IPR000067	Flagellar M-ring protein FliF	Family
X [auth A]	IPR006136	Flagellar biosynthetic protein FlhB	Family
X [auth A]	IPR006135	Type III secretion system substrate exporter	Family
X [auth A]	IPR029025	Type III secretion system substrate exporter, C-terminal	Homologous Superfamily
AA [auth H], BA [auth I], CA [auth J], Y [auth F], Z [auth G]	IPR005838	Type III secretion system inner membrane P protein	Family
AA [auth H], BA [auth I], CA [auth J], Y [auth F], Z [auth G]	IPR005837	Flagellar transport protein FliP	Family
EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], EA [auth L], FA [auth M], GA [auth N], HA [auth O], IA [auth P], JA [auth Q]	IPR001624	Flagellar hook-basal body complex protein FliE	Family
KA [auth R], LA [auth S], MA [auth T], NA [auth U], OA [auth V]	IPR019776	Flagellar basal body rod protein, conserved site	Conserved Site
KA [auth R], LA [auth S], MA [auth T], NA [auth U], OA [auth V]	IPR001444	Flagellar basal body rod protein, N-terminal	Domain
KA [auth R], LA [auth S], MA [auth T], NA [auth U], OA [auth V]	IPR006300	Flagellar basal-body rod protein FlgB	Family
VA [auth z], WA [auth 1], XA [auth 2], YA [auth 3]	IPR006305	Flagellar biosynthesis protein FliQ	Family
VA [auth z], WA [auth 1], XA [auth 2], YA [auth 3]	IPR002191	Bacterial export protein family 3	Family
PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], UA [auth b]	IPR019776	Flagellar basal body rod protein, conserved site	Conserved Site
PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], UA [auth b]	IPR006299	Flagellar basal-body rod protein FlgC	Family
PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], UA [auth b]	IPR010930	Flagellar basal-body/hook protein, C-terminal domain	Domain
PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], PA [auth W], QA [auth X], RA [auth Y], SA [auth Z], TA [auth a], UA [auth b]	IPR001444	Flagellar basal body rod protein, N-terminal	Domain
DA [auth K]	IPR002010	Type III secretion system inner membrane R protein	Family
DA [auth K]	IPR006303	Flagellar biosynthesis protein FliR	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

12DU | pdb_000012du

In situ cryo-EM structure of the flagellar export gate in complex with the FliF RBM12 ring in Borrelia burgdorferi

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage