12UU | pdb_000012uu

The AAV2 capsid in complex with IgG-Fab#3-4

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AE [auth Kl], AF [auth el], BE [auth Ll], BF [auth fl], CE [auth Ml], AE [auth Kl], AF [auth el], BE [auth Ll], BF [auth fl], CE [auth Ml], CF [auth gl], DE [auth Nl], DF [auth hl], EE [auth Ol], EF [auth il], FE [auth Pl], FF [auth jl], GE [auth Ql], GF [auth kl], HE [auth Rl], HF [auth ll], IE [auth Sl], IF [auth ml], JE [auth Tl], JF [auth nl], KE [auth Ul], KF [auth ol], LE [auth Vl], LF [auth pl], ME [auth Wl], MF [auth ql], NE [auth Xl], NF [auth rl], OE [auth Yl], OF [auth sl], PE [auth Zl], PF [auth tl], QD [auth Al], QE [auth 1l], QF [auth ul], RD [auth Bl], RE [auth 2l], RF [auth vl], SD [auth Cl], SE [auth 3l], SF [auth wl], TD [auth Dl], TE [auth 4l], TF [auth xl], UD [auth El], UE [auth 5l], UF [auth yl], VD [auth Fl], VE [auth 6l], VF [auth zl], WD [auth Gl], WE [auth al], WF [auth 7l], XD [auth Hl], XE [auth bl], XF [auth 8l], YD [auth Il], YE [auth cl], ZD [auth Jl], ZE [auth dl]	IgG Fab3-4 light chain	-	-	-
AC [auth Sh], AD [auth mh], BC [auth Th], BD [auth nh], CC [auth Uh], AC [auth Sh], AD [auth mh], BC [auth Th], BD [auth nh], CC [auth Uh], CD [auth oh], DC [auth Vh], DD [auth ph], EC [auth Wh], ED [auth qh], FC [auth Xh], FD [auth rh], GC [auth Yh], GD [auth sh], HC [auth Zh], HD [auth th], IB [auth Ah], IC [auth 1h], ID [auth uh], JB [auth Bh], JC [auth 2h], JD [auth vh], KB [auth Ch], KC [auth 3h], KD [auth wh], LB [auth Dh], LC [auth 4h], LD [auth xh], MB [auth Eh], MC [auth 5h], MD [auth yh], NB [auth Fh], NC [auth 6h], ND [auth zh], OB [auth Gh], OC [auth ah], OD [auth 7h], PB [auth Hh], PC [auth bh], PD [auth 8h], QB [auth Ih], QC [auth ch], RB [auth Jh], RC [auth dh], SB [auth Kh], SC [auth eh], TB [auth Lh], TC [auth fh], UB [auth Mh], UC [auth gh], VB [auth Nh], VC [auth hh], WB [auth Oh], WC [auth ih], XB [auth Ph], XC [auth jh], YB [auth Qh], YC [auth kh], ZB [auth Rh], ZC [auth lh]	IgG Fab3-4 heavy chain	-	-	-
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	Capsid protein VP1	structural molecule activity	import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell clathrin-dependent endocytosis viral process symbiont entry into host import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell clathrin-dependent endocytosis viral process symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host symbiont-mediated disruption of host anatomical structure symbiont entry into host cell via permeabilization of host membrane symbiont-mediated disruption of host cellular anatomical structure symbiont-mediated perturbation of host membrane disruption of anatomical structure in another organism	viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid host intracellular membrane-bounded organelle host cellular component host intracellular part host cell nucleus other organism part host cell nucleolus host cell nuclear part host intracellular organelle cellular anatomical structure host cell part viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid host intracellular membrane-bounded organelle host cellular component host intracellular part host cell nucleus other organism part host cell nucleolus host cell nuclear part host intracellular organelle cellular anatomical structure host cell part host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	IPR013607	Phospholipase A2-like domain	Domain
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	IPR016184	Capsid/spike protein, ssDNA virus	Homologous Superfamily
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	IPR001403	Coat protein VP1/VP2, Parvovirus	Domain
A, AA [auth 1], AB [auth u], B, BA [auth 2], A, AA [auth 1], AB [auth u], B, BA [auth 2], BB [auth v], C, CA [auth 3], CB [auth w], D, DA [auth 4], DB [auth x], E, EA [auth 5], EB [auth y], F, FA [auth 6], FB [auth z], G, GA [auth a], GB [auth 7], H, HA [auth b], HB [auth 8], I, IA [auth c], J, JA [auth d], K, KA [auth e], L, LA [auth f], M, MA [auth g], N, NA [auth h], O, OA [auth i], P, PA [auth j], Q, QA [auth k], R, RA [auth l], S, SA [auth m], T, TA [auth n], U, UA [auth o], V, VA [auth p], W, WA [auth q], X, XA [auth r], Y, YA [auth s], Z, ZA [auth t]	IPR036952	Parvovirus coat protein VP1/VP2	Homologous Superfamily