12UT | pdb_000012ut

The AAV2 capsid in complex with IgA-Fab#3-2

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AE [auth Kl], AF [auth kl], BE [auth Ll], BF [auth ll], CE [auth Ml], AE [auth Kl], AF [auth kl], BE [auth Ll], BF [auth ll], CE [auth Ml], CF [auth ml], DE [auth Nl], DF [auth nl], EE [auth Ol], EF [auth ol], FE [auth Pl], FF [auth pl], GE [auth Ql], GF [auth ql], HE [auth Rl], HF [auth rl], IE [auth Sl], IF [auth sl], JE [auth Tl], JF [auth tl], KE [auth Ul], KF [auth ul], LE [auth Vl], LF [auth vl], ME [auth Wl], MF [auth wl], NE [auth Xl], NF [auth xl], OE [auth Yl], OF [auth yl], PE [auth Zl], PF [auth zl], QD [auth Al], QE [auth al], QF [auth 0l], RD [auth Bl], RE [auth bl], RF [auth 1l], SD [auth Cl], SE [auth cl], SF [auth 2l], TD [auth Dl], TE [auth dl], TF [auth 3l], UD [auth El], UE [auth el], UF [auth 4l], VD [auth Fl], VE [auth fl], VF [auth 5l], WD [auth Gl], WE [auth gl], WF [auth 6l], XD [auth Hl], XE [auth hl], XF [auth 7l], YD [auth Il], YE [auth il], ZD [auth Jl], ZE [auth jl]	IgA-Fab3-2 Light chain	-	-	-
AC [auth Sh], AD [auth sh], BC [auth Th], BD [auth th], CC [auth Uh], AC [auth Sh], AD [auth sh], BC [auth Th], BD [auth th], CC [auth Uh], CD [auth uh], DC [auth Vh], DD [auth vh], EC [auth Wh], ED [auth wh], FC [auth Xh], FD [auth xh], GC [auth Yh], GD [auth yh], HC [auth Zh], HD [auth zh], IB [auth Ah], IC [auth ah], ID [auth 0h], JB [auth Bh], JC [auth bh], JD [auth 1h], KB [auth Ch], KC [auth ch], KD [auth 2h], LB [auth Dh], LC [auth dh], LD [auth 3h], MB [auth Eh], MC [auth eh], MD [auth 4h], NB [auth Fh], NC [auth fh], ND [auth 5h], OB [auth Gh], OC [auth gh], OD [auth 6h], PB [auth Hh], PC [auth hh], PD [auth 7h], QB [auth Ih], QC [auth ih], RB [auth Jh], RC [auth jh], SB [auth Kh], SC [auth kh], TB [auth Lh], TC [auth lh], UB [auth Mh], UC [auth mh], VB [auth Nh], VC [auth nh], WB [auth Oh], WC [auth oh], XB [auth Ph], XC [auth ph], YB [auth Qh], YC [auth qh], ZB [auth Rh], ZC [auth rh]	IgA-Fab3-2 Heavy chain	-	-	-
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	Capsid protein VP1	structural molecule activity	import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell clathrin-dependent endocytosis viral process symbiont entry into host import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell clathrin-dependent endocytosis viral process symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host symbiont-mediated disruption of host anatomical structure symbiont entry into host cell via permeabilization of host membrane symbiont-mediated disruption of host cellular anatomical structure symbiont-mediated perturbation of host membrane disruption of anatomical structure in another organism	viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid host intracellular membrane-bounded organelle host cellular component host intracellular part host cell nucleus other organism part host cell nucleolus host cell nuclear part host intracellular organelle cellular anatomical structure host cell part viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid host intracellular membrane-bounded organelle host cellular component host intracellular part host cell nucleus other organism part host cell nucleolus host cell nuclear part host intracellular organelle cellular anatomical structure host cell part host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR013607	Phospholipase A2-like domain	Domain
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR016184	Capsid/spike protein, ssDNA virus	Homologous Superfamily
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR001403	Coat protein VP1/VP2, Parvovirus	Domain
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR036952	Parvovirus coat protein VP1/VP2	Homologous Superfamily