11YJ | pdb_000011yj

In situ subtomogram average of the transition zone doublet microtubule in human airway cilia (composite map)


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain
AF [auth X2],
BF [auth X3],
YE [auth X0],
ZE [auth X1]
PF05018CFA20 domain (CFA20_dom)CFA20 domainThis domain is characteristic of cilia- and flagella-associated protein 20 (CFA20). CFA20 is a cilium- and flagellum-specific protein that plays a role in axonemal structure organisation and motility [1,2]. In Chlamydomonas reinhardtii, it stabilises ...This domain is characteristic of cilia- and flagella-associated protein 20 (CFA20). CFA20 is a cilium- and flagellum-specific protein that plays a role in axonemal structure organisation and motility [1,2]. In Chlamydomonas reinhardtii, it stabilises outer doublet microtubules (DMTs) of the axoneme and may work as a scaffold for intratubular proteins, such as tektin and PACRG, to produce the beak structures in DMT1 [2,3]. Other proteins contain a domain with homology to CFA20. WDR90/POC16 contains such a domain in its N terminus, followed by a large C-terminal domain with multiple WD40 repeats [2]. This domain is also present in the N terminus of uncharacterised protein C3orf67.
Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain
PF00091Tubulin/FtsZ family, GTPase domain (Tubulin)Tubulin/FtsZ family, GTPase domainThis family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ...This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules.
Domain
PF03953Tubulin C-terminal domain (Tubulin_C)Tubulin C-terminal domainThis family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ...This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tubulin is the major component of microtubules. (The FtsZ GTPases have been split into their won family).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
BG [auth 8A],
CG [auth 8C],
DG [auth 8B]
Enkurin domain-containing protein 1
AG [auth 9B],
ZF [auth 9A]
Microtubule-associated protein 9
Calcyphosin-like protein -
CF [auth Y0],
DF [auth Y1],
EF [auth Y2]
Centrosomal protein of 41 kDa-
AF [auth X2],
BF [auth X3],
YE [auth X0],
ZE [auth X1]
Cilia- and flagella-associated protein 20
Tubulin beta-4B chain
Tubulin alpha-1A chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
BG [auth 8A],
CG [auth 8C],
DG [auth 8B]
IPR027012Enkurin domainDomain
BG [auth 8A],
CG [auth 8C],
DG [auth 8B]
IPR052102Enkurin/enkurin domain-containing protein 1Family
AG [auth 9B],
ZF [auth 9A]
IPR026106Microtubule-associated protein 9Family
IPR051581Calcium-Binding Signalling familyFamily
IPR018247EF-Hand 1, calcium-binding siteBinding Site
IPR002048EF-hand domainDomain
IPR011992EF-hand domain pairHomologous Superfamily
CF [auth Y0],
DF [auth Y1],
EF [auth Y2]
IPR001763Rhodanese-like domainDomain
CF [auth Y0],
DF [auth Y1],
EF [auth Y2]
IPR036873Rhodanese-like domain superfamilyHomologous Superfamily
CF [auth Y0],
DF [auth Y1],
EF [auth Y2]
IPR051889Centrosomal protein of 41 kDaFamily
AF [auth X2],
BF [auth X3],
YE [auth X0],
ZE [auth X1]
IPR040441Cilia- and flagella-associated protein 20/CFAP20DCFamily
AF [auth X2],
BF [auth X3],
YE [auth X0],
ZE [auth X1]
IPR007714CFA20 domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR000217TubulinFamily
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR000217TubulinFamily
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR002452Alpha tubulinFamily
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
BG [auth 8A],
CG [auth 8C],
DG [auth 8B]
Q9H0I2
AG [auth 9B],
ZF [auth 9A]
Q49MG5
Q8WWF8
CF [auth Y0],
DF [auth Y1],
EF [auth Y2]
Q9BYV8
AF [auth X2],
BF [auth X3],
YE [auth X0],
ZE [auth X1]
Q9Y6A4
P68371
Q71U36