6BJY
VSV Nucleocapsid with Polyamide Bound
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Rhabdovirus nucleoprotein-like | 8041903 | 3001763 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | Rhabdo_ncap | e6bjyA1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: Rhabdo_ncap | ECOD (1.6) |
C [auth B] | Rhabdo_ncap | e6bjyB1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: Rhabdo_ncap | ECOD (1.6) |
D [auth C] | Rhabdo_ncap | e6bjyC1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: Rhabdo_ncap | ECOD (1.6) |
E [auth D] | Rhabdo_ncap | e6bjyD1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: Rhabdo_ncap | ECOD (1.6) |
F [auth E] | Rhabdo_ncap | e6bjyE1 | A: alpha complex topology | X: P40 nucleoprotein-like | H: Rhabdovirus nucleocapsid protein (From Topology) | T: Rhabdovirus nucleocapsid protein | F: Rhabdo_ncap | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | PF00945 | Rhabdovirus nucleocapsid protein (Rhabdo_ncap) | Rhabdovirus nucleocapsid protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth R] | RNA (45-MER) | - | - | - |
B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | Nucleoprotein |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | IPR035961 | Rhabdovirus nucleoprotein-like | Homologous Superfamily |
B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | IPR000448 | Rhabdovirus nucleocapsid | Domain |
B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | IPR023330 | Rhabdovirus nucleocapsid, N-terminal | Homologous Superfamily |
B [auth A], C [auth B], D [auth C], E [auth D], F [auth E] | IPR023331 | Rhabdovirus nucleocapsid, C-terminal | Homologous Superfamily |