Annotations: 6VCC

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00778	e6vccA1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
B	PF00778	e6vccB1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
C	PF00778	e6vccC1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
D	PF00778	e6vccD1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
E	PF00778	e6vccE1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
F	PF00778	e6vccF1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
G	PF00778	e6vccG1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
H	PF00778	e6vccH1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
I	PF00778	e6vccI1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
J	PF00778	e6vccJ1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
K	PF00778	e6vccK1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)
L	PF00778	e6vccL1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: PF00778	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
B	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
C	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
D	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
E	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
F	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
G	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
H	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
I	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
J	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
K	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)
L	2.40.240.130	Mainly Beta	Beta Barrel	Ribosomal Protein L25	Chain P	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF00778	DIX domain (DIX)	DIX domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Segment polarity protein dishevelled homolog DVL-2	small GTPase binding protein binding binding enzyme binding GTPase binding signaling receptor binding G protein-coupled receptor binding frizzled binding protein-macromolecule adaptor activity molecular adaptor activity identical protein binding protein domain specific binding kinase binding protein kinase binding	developmental process multicellular organism development multicellular organismal process segmentation anatomical structure development pattern specification process regionalization segment specification heart development animal organ development circulatory system development system development tissue morphogenesis anatomical structure morphogenesis developmental process multicellular organism development multicellular organismal process segmentation anatomical structure development pattern specification process regionalization segment specification heart development animal organ development circulatory system development system development tissue morphogenesis anatomical structure morphogenesis epithelium development convergent extension involved in organogenesis convergent extension morphogenesis of an epithelium tissue development protein localization localization cellular localization cellular macromolecule localization macromolecule localization cellular process cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling canonical Wnt signaling pathway biological regulation cell communication signal transduction Wnt signaling pathway embryonic epithelial tube formation tube formation epithelial tube formation tube morphogenesis primary neural tube formation establishment of tissue polarity animal organ morphogenesis non-canonical Wnt signaling pathway establishment of planar polarity regulation of animal organ morphogenesis planar cell polarity pathway involved in neural tube closure embryonic morphogenesis nervous system development neural tube closure neural tube formation tube closure regulation of developmental process chordate embryonic development Wnt signaling pathway, planar cell polarity pathway embryo development embryo development ending in birth or egg hatching establishment of planar polarity of embryonic epithelium morphogenesis of a polarized epithelium regulation of establishment of planar polarity involved in neural tube closure epithelial tube morphogenesis regulation of anatomical structure morphogenesis morphogenesis of embryonic epithelium neural tube development tube development establishment of planar polarity involved in neural tube closure regulation of establishment of planar polarity anatomical structure formation involved in morphogenesis heart morphogenesis positive regulation of cell communication positive regulation of signal transduction positive regulation of biological process regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus positive regulation of JNK cascade regulation of intracellular signal transduction JNK cascade intracellular signaling cassette positive regulation of cellular process regulation of signaling positive regulation of MAPK cascade regulation of JNK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade regulation of response to stimulus MAPK cascade regulation of cell communication positive regulation of signaling cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process organic substance metabolic process organic substance biosynthetic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process cellular metabolic process primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process organic cyclic compound metabolic process regulation of gene expression biosynthetic process organic cyclic compound biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process neural plate development convergent extension involved in gastrulation morphogenesis of an epithelial sheet gastrulation convergent extension involved in neural plate elongation neural plate elongation neural plate morphogenesis positive regulation of phosphorylation regulation of catalytic activity regulation of transferase activity positive regulation of phosphate metabolic process regulation of MAP kinase activity positive regulation of protein serine/threonine kinase activity positive regulation of metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process phosphorus metabolic process protein modification process positive regulation of protein phosphorylation positive regulation of MAP kinase activity protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process positive regulation of JUN kinase activity regulation of molecular function positive regulation of kinase activity regulation of kinase activity regulation of protein serine/threonine kinase activity macromolecule modification regulation of phosphorus metabolic process regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of cellular metabolic process positive regulation of molecular function positive regulation of protein modification process protein metabolic process positive regulation of protein kinase activity organonitrogen compound metabolic process positive regulation of transferase activity positive regulation of catalytic activity regulation of protein kinase activity regulation of JUN kinase activity regulation of phosphorylation regulation of cellular component organization positive regulation of cellular component organization cellular developmental process regulation of neuron projection arborization cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis regulation of cell morphogenesis cellular component organization positive regulation of developmental process neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation positive regulation of cell projection organization cellular component organization or biogenesis plasma membrane bounded cell projection organization regulation of cell projection organization positive regulation of neuron projection arborization generation of neurons neuron projection arborization neuron development positive regulation of macromolecule biosynthetic process transcription by RNA polymerase II regulation of transcription by RNA polymerase II positive regulation of nucleobase-containing compound metabolic process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of DNA-templated transcription positive regulation of biosynthetic process positive regulation of RNA biosynthetic process positive regulation of cellular biosynthetic process embryonic heart tube development embryonic heart tube morphogenesis heart looping determination of bilateral symmetry embryonic organ development determination of left/right symmetry specification of symmetry embryonic organ morphogenesis determination of heart left/right asymmetry left/right pattern formation positive regulation of hydrolase activity regulation of hydrolase activity regulation of GTPase activity positive regulation of GTPase activity ear morphogenesis ear development sensory organ development sensory organ morphogenesis inner ear development cochlea development inner ear morphogenesis cochlea morphogenesis cell population proliferation regulation of cell population proliferation outflow tract morphogenesis	apical part of cell cellular anatomical entity intracellular anatomical structure cytoplasm cytosol intracellular organelle cytoskeleton organelle intracellular non-membrane-bounded organelle non-membrane-bounded organelle cell periphery cell cortex membrane-bounded organelle intracellular vesicle apical part of cell cellular anatomical entity intracellular anatomical structure cytoplasm cytosol intracellular organelle cytoskeleton organelle intracellular non-membrane-bounded organelle non-membrane-bounded organelle cell periphery cell cortex membrane-bounded organelle intracellular vesicle intracellular membrane-bounded organelle cytoplasmic vesicle clathrin-coated vesicle coated vesicle vesicle plasma membrane membrane inclusion body aggresome nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen lateral plasma membrane nuclear body

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR000591	DEP domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR008339	Dishevelled family	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR024580	Dishevelled C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036388	Winged helix-like DNA-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR015506	Dishevelled-related protein	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR038207	DIX domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR003351	Dishevelled protein domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR008341	Dishevelled-2	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR001158	DIX domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR036034	PDZ superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR001478	PDZ domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.